Detail



ID : Ahg327739

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327739|fgenesh1_pm.C_scaffold_6002959
Sequence
ATGGGAGGTT GCTGTAGTTC TTCGAGGAAG TCACATCTTG TTGGAACACC TGTTTACTAT TATTGTCCAG AATCTTTTGA AGAGCTCGGG CCTTCAGGAG CTCGAGCTGG TGTGGGATCA GCATTCACCA CAGGCCTCTT GGTTGATATA GGTTTGGATT TCTCCATACC TGACACCTTT TGTGCTCCTG CTCCTCTTCC ATATGATTTG CTTTTGGGAC GACCACAATG CACAGATTCT GAGTCCATCA AAGGAAGGAT GAGTGGAAGC AGTTTTGAAA CGCTAGCGAC ATGTGAAGAT CTTGGGGAAC TAGACTGTAA AACTCAAGCC AGCTCAGTCA TTCTTTCACC GAGGAAATCC GATTTCTCTA AACAGAAAGG ATTGAAGATA TTGGTAGATG AAGAGGAGGA CTGTTGTCCT ATTTGCTTTG AAGATTATGA TGTTGAGAAT CCAAGACTAA CGACAAACTG TGAGCACGAT TTTCACCTCT CTTGTCTTCT GGAGTGGATT GAAAGAAGCG ATAGATGCCC AATTTGTGAT AAGGAAGTTG TGTTTGATGA TTGTTTGAAC TAG 
Length573
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23368049.. 23369228
Download Sequence
A.thaliana
AGI-codeAT4G00335.1
DescriptionRING-H2 finger B1A
TAIR curator summary
Alias[RHB1A][RING-H2 finger B1A]
Gene coexpression
MR
MR Locus Description
12 Ahg479290 HAL3-like protein A
27.4226 Ahg921680 Protein kinase superfamily protein
27.7489 Ahg915235 Homeodomain-like superfamily protein
42.2137 Ahg914712
45.7821 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
50.9902 Ahg913035 syntaxin, putative
54.7723 Ahg330119 zinc ion binding
55.0999 Ahg927841 lecithin:cholesterol acyltransferase 3
61.9677 Ahg482891
66.9627 Ahg313276 transmembrane receptors;ATP binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression