Detail


ID : Ahg479338

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479338|fgenesh2_kg.3__2039__AT3G18380.2
Sequence
GGTTTCGTTG TCGTTGGGTC ACCGGCCGTA CTAGAGATTC ACCGTGAATT CGAAAATTAA GTGAGAGAAG CTCTGATTTG ATACCACTTT CTGCCGCCAA TTTTTGTTTT TTTTTGTGTT CCCCGGTGAG ACGAAGGAGA TACCATGGGT CGACCTCCCA GTAATGGCGG TCCGGCGTTT CGATTTATCC TGCCCGAGGT AACGGAGATG GAAGCAATTT TGCTACAGCA TAATACAGCA ATGCCAGGTC GACATATTCT TGAAGCTCTT GCTGATAAGT TTAGTGAATC ACCTGAGCGG AAGGGGAAAA TTGTTGTGCA ATTCAAGCAA ATCTGGAACT GGTTCCAAAA TAGGCGATAT GCTTTAAGAG CAAGGGGAAA TAAAGCTCCT GGGAAGCTAA ATGTATCTTC CATGCCGCGT ATGGATTTAC CAAATCAGAT GAGAAATGTG GTTCAACCGT TAGCCGTTCC TAAAACCAAT CATATGACTG GAAATTTACC CGGCATGACG CCTGCCCCTT CCGGTATTTT AGTTCCCGGT GTCATGAGGA GTGGTTCAGA CAACTCTTAC TTGGAATTTG AAGCCAAATC TGCCAGGGAT GGTGCTTGGT ATGATGTGCA AGCTTTCCTA GCTCATAGAA ACTTGGAGAT TGGTGATCCG GAAGTGCAGG TTCGATTTGC GGGTTTTGAA GTTGAAGAAG ATGAATGGAT AAATGTCAAA AAGCACGTAA GACAAAGGTC TCTCCCATGT GAAGCATCAG AATGTGTTGC AGTTCTTGCT GGAGATCTCG TACTTTGTTT CCAGGAAGGA AAAGATCAAG CTCTTTACTT TGATGCCATT GTTCTTGACG CACAAAGAAG AAGACATGAT GTCAGAGGTT GTCGTTGTAG ATTCTTGGTG CGTTACAGCC ACGACCAGTC CGAGCAGGAA ATTGTTCCTT TGAGGAAGAT TTGTCGGCGG CCCGAGACAG ATTACAGGCT ACAACAACTT CACAACGCTG TAAACGATTT GGGTAACTCG AATCAGCATC AGATACCCGC TCTAGATGCG GCTGCGAAAA CCCCTGTTTC ACAATCCGGA GCTACAGTTC CCATTGTTGC ACCCGAGCCA AAAGATCCGA GCCTGAGTGC CACTCCAGTC ACTTTGGTTC AGCCTAGCTC CAGTGCAGCC ACTGTCCCCG CTGGTTCTGC CTAGGCCATG TAATTTCTAT CCCCTTTTGT AACCACCATT TTCACAGTTA CTAATAGAGC TTTAGAGGTT AACGGATCAT ATGCATTTGT AATCTCACAC TGTGACTTAG TTATCTAAAG CTGTATCATG CCATGTTACT TGATCCTTCA TGTATGATGG AATAATTATG GTTTAGTCCG GTTTATTCAT CATCTGTTGA TGGTCACCGG TTTACTCTTT TGAACAAACA TGCTCGAATC ATGTTGATTT ATTCT
Length1445
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7430664.. 7433137
Download Sequence
A.thaliana
AGI-codeAT3G18380.2
Descriptionsequence-specific DNA binding transcription factors;sequence-specific DNA binding
TAIR curator summary
Alias[DTF2][SHH2][DNA-BINDING TRANSCRIPTION FACTOR 2][SAWADEE homeodomain homolog 2]
Gene coexpression
MR
MR Locus Description
15.4919 Ahg942741 Protein of unknown function (DUF616)
16.8523 Ahg480841 Transducin/WD40 repeat-like superfamily protein
26.3818 Ahg480240 Minichromosome maintenance (MCM2/3/5) family protein
33 Ahg940941 DEAD box RNA helicase family protein
35.7491 Ahg926563 P-loop containing nucleoside triphosphate hydrolases superfamily protein
37.9473 Ahg942140 Flavin-binding monooxygenase family protein
39.2428 Ahg353309
44.2719 Ahg471382
46.4543 Ahg495232 cleavage and polyadenylation specificity factor 160
50.9706 Ahg496603 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression