Detail



ID : Ahg940941

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940941|scaffold_601485.1
Sequence
TTCTCCTTCC AGGAATTGGG TATGGCTGCT ACAGCTACTG CTTCTGCAAT TCGTTACGCT CCTGAGGATC CGAATCTTCC TAAGCCGTGG AAAGGTCTTG TGGATAGTAG AACTGGCTAT CTCTACTTTT GGAACCCAGA GACCAATGTT ACTCAGTACG AGAGACCAGC TTCTTCTGCT CCTCCCAAGC TTGCTGCTAT TCCCATAAGT TCTTCGGTTC AGACTACTCA GCAATCTTCT TCTGGATTTA ACTCTGGCAA GGAAGAGGAT AAGTATGGTA GGGGCAGTGA TGGGCCTAAG TCTGACTCTG GATCAAGGTT TAATGAGGCT GGAAGAATGG GACCAACAAT TTCTAATGAT ACTGCTAGTG GACTAGGGAA TGCTGCATCT GGTGGATCAT CTGCCAGAGG GCCTCCTTCT TCAGCGGCAG GAAATGAATT GTCCCCAGAG GCCTATTGCC GCAAACATGA AATTACTGTC AGTGGAGGCC AAGTACCACC ACCTTTAATG TCTTTTGAAG CCACTGGTCT TCCCCCAGAG CTTCTGCGGG AGAGTCACAA TTTTATGCCA TATGCGCTCT CTTTTGTCCC AGGTGCGATA TTTGCTCTTG GAGGAGCTAA TGTCGTACGC TATGCCACTT CTTTGAGGTC CTTGCAAATT ATTTGGAGTG CCCTTTTTGG TGGACCAAAT ATTTTGAGAT ATCCTCCTGC TGCAGGTTTT AACAGCTATC CTGTGTTGCC TGCAAACGGG AGGATGATTG CAGGATTCTC AGCTCCATCT CCAATTCAAG CTCAGTCTTG GCCAATTGCG ATGCAAAACA GAGACATAGT AGCCATTGCT AAAACAGGCT CTGGAAAAAC TCTGGGTTAC TTGATTCCTG GTTTCATGCA TCTCCAACGA ATCCACAATG ATTCACGAAT GGGCCCAACA ATCTTGGTAT TGTCACCTAC TAGGGAGTTG GCCACACAAA TCCAAGTTGA AGCTCTGAAA TTTGGAAAGT CATCCAAAAT TTCGTGTGCG TGCTTGTATG GTGGAGCACC CAAGGGTCCT CAGCTGAAGG AAATAGAAAG AGGTGTAGAT ATTGTTGTTG CAACTCCCGG GCGACTGAAT GATATCCTTG AAATGAGGAG AATCAGTCTG CATCAAGTAT CTTATCTTGT GCTGGACGAG GCTGATAGAA TGCTGGACAT GGGGTTTGAA CCTCAGATCA GAAAAATTGT GAACGAGGTT CCCACTAAGC GCCAAACTCT TATGTACACA GCAACATGGC CAAAGGAGGT CAGGAAAATC GCAGCTGATC TACTTGTTAA CCCTGCCCAA GTCAACATTG GTAATGTTGA TGAGCTTGTG GCAAATAAGT CCATTACTCA GACTATTGAA GTCTTAGCAC CGATGGAGAA ACATAGCAGG TTAGAGCAGA TATTGCGGTC TCAGGAACCG GGTTCCAAGA TCATAATTTT CTGTTCAACC AAAAGGATGT GTGATCAACT GGCAAGGAAC CTGACCCGTA CGTTTGGAGC CGCTGCTATA CATGGAGACA AGTCTCAGGC TGAGAGAGAC GACGTACTGA ACCAATTTAG AAGTGGTAGG ACTCCTGTTC TTGTTGCAAC CGATGTAGCT GCTCGTGGAC TTGACGTTAA GGACATAAGG GTGGTGGTCA ACTATGATTT TCCAAATGGA GTAGAGGATT ATGTCCATAG AATCGGAAGA ACTGGAAGAG CTGGAGCTAC CGGTCTAGCT TACACCTTTT TTGGAGACCA AGATGCAAAA CATGCTTCAG ATCTGATCAA GATCTTGGAA GGAGCAAACC AGAAAGTTCC TCCACAGGTC CGCGAAATGG CTACACGTGG TGGTGGTGGA ATGAACAAAT TTCGCCGCTG GGGACCACCT TCCAGTGGTG GTGGTGGTGG AGGCCGTGGT GGCTATGGTG ATTCTGGTTA CAGTGGTCGT GGTGAGTCTG GCTATGGTGG TCGTGGTGAT TCTGGTTATG GTGGTCGTGG TGATTCTGGC GGTAGAGGAA GCTGGGCTCC TTCACGTGAC AGTAGCAGCT CGGGATGGGG AAGAGAGAGA AGCCGTAGTC CTGAGAGATT CAAAGGAGGT CCACCGTCCA CTTCTTCTCC ACCTCGCAGC TTTCATGAGG CGATGATGAT GAGAAATAGG TAACTCATCA GAATTTTAAC CAG 
Length2183
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5674117.. 5677618
Download Sequence
A.thaliana
AGI-codeAT5G14610.1
DescriptionDEAD box RNA helicase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.5167 Ahg491000 beta-galactosidase 3
30.4631 Ahg928939 Leucine-rich repeat (LRR) family protein
33 Ahg479338 sequence-specific DNA binding transcription factors;sequence-specific DNA binding
40 Ahg488363 homeobox protein 30
43.0233 Ahg923183 receptor-like kinase 1
53.3667 Ahg926563 P-loop containing nucleoside triphosphate hydrolases superfamily protein
55.7853 Ahg943148 Cupredoxin superfamily protein
57.7235 Ahg346338 Leucine-rich repeat protein kinase family protein
59.2874 Ahg493425 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
60.9918 Ahg480563 plasma membrane intrinsic protein 2;8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression