Detail


ID : Ahg479372

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479372|fgenesh2_kg.3__2073__AT3G18660.2
Sequence
CTGTCTCAAT CCATCAGTTT TATATGGCAA ACTCTCCCGC TGCTCCTGCA GCCACCGCTA CTACCGGCGG TGACTCCCGG CGACGCCTCT CCGCGTCCAT AGAAGCAATA TGCAAGAGGA GATTCCGAAG AAATAGCAAA GGCAGTGGTA GATCGGATAT GCTGAAACCG TTTAGTATCA TAAATTTTCC AACACAAGAC AAAAACACTA GTTGTTGTTG TTGCAGCAAG TTTCAGATCG TGAAGCTTCT CTTGTTTATC CTTCTCTCTG CTACTCTATT CACCATTATT TATTCTCCTG AAGCTTATCA TCATTCTCTT TCACACTCTT CTTCTCGATG GATATGGAGA AGACAAGATC CTCGTTACGT CTCGGATCTG GACATAAACT GGGACGATGT GACCAAAACC CTTGAGAGCA TCGAAGAAGG CCGTACGATC GGTGTCTTGA ATTTCGATTC GAACGAGATT CAGCGATGGA GAGAAGTTTC CAAGAGCAAC GACAATAAGG ATGAAGAAAA CGTTGTCGTA TTGAATCTAG ACTACGCGGA CAAGAACGTG ACTTGGGACG CACTCTATCC AGAGTGGATC GATGAGGAGC AAGAAACAGA GGTCCCTGTT TGTCCTAATC TCCCGAAGAT TAAGGTACCT ACAAGAAGAC TTGATCTTAT CGTCGTGAAG CTTCCTTGTC GGAAAGAAGG AAATTGGTCG AGAGACGTCG GGAGATTGCA TCTACAGCTG GCGGCTGCAA CGGTGGCGGC TTCGGCCAAA GGGCTTTTCA GGGGACATGT GTTGTTTGTC TCTAGATGCT TTCCGATTCC GAATCTTTTC CGGTGTAAAG ATCTAGTGTC TCGGAGAGGC GATGTTTGGT TGTATAAACC TAATCTTGAT ACCTTGAGAG ATAAGCTTCA GCTTCCTGTA GGTTCTTGTG AGCTCTCTCT TCCCCTCGGC ATCAAAGAGA GACCAAGCTT AGGAAACCCT AAACGAGAAG CTTACGCAAC GATTCTTCAC TCCGCTCACG TTTACGTCTG TGGTGCAATC GCGGCGGCTC AGAGCATAAG ACAGTCCGGG TCAACGAGAG ACCTCGTGAT CCTTGTCGAT GATAACATAA GCGGTTACCA CCGGAGTGGA CTAGAAGCCG CAGGTTGGCA AATCCGGACG ATACAGAGGA TTCGAAACCC TAAAGCAGAG AAAGATGCTT ACAACGAGTG GAACTACAGC AAGTTCCGGC TGTGGCAGCT GACTGATTAC GACAAAATCA TCTTCATCGA CGCGGATCTC TTAATCTTGA GAAACATCGA TTTCCTGTTC TCGATGCCTG AAATCTCAGC TACAGGAAAC AACGGAACTC TCTTTAATTC AGGAGTTATG GTGATCGAGC CTTGCAACTG TACGTTTCAG CTTTTGATGG AACATATAAA CGAGATTGAG TCTTACAACG GAGGAGATCA AGGTTACTTA AATGAGGTAT TCACATGGTG GCACAGGATT CCGAAACATA TGAATTTCTT GAAGCATTTT TGGGTTGGCG ATGAAGATGA CGTAAGACGC AAGAAAACAG AGCTTTTTGG AGCAGAGCCT CCTGTTCTTT ATGTTCTTCA TTACCTGGGA ATGAAGCCGT GGTTATGCTA CCGTGACTAC GACTGTAACT TCAACTCCGA CATATTTGTT GAGTTTGCTA CAGATATCGC TCACCGAAAA TGGTGGATGG TCCACGACGC CATGCCAGAG GAACTTCACC AGTTTTGTTA CTTGCGATCC AAGCAAAAGG CACAGCTGGA ATATGATCGC CGGCAAGCAG AGGCCGCAAA TTATGCCGAT GGTCACTGGA AAATAAGAGT AAAGGACCCG AGATTCAAGA TTTGCATCGA TAAATTGTGT AATTGGAAAA GTATGTTGCG GCATTGGGGA GAATCAAATT GGACCGACTA CGAGTCTTTT GTTCCCACCC CACCGGCCAT TACCGCCGCT CGGAGATCGT CACTTCCCGG CCATAACTTG TGACGCAATA TTTATACATA CTTTATATCA ATGGATTTCA TGAGATTTTT TTTATTTGAA TTGTTTCTGC GAGATTAGGT AAATATATAG TTTGTTCAAT TTGAATAAAA CAATTTTTT
Length2119
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7539636.. 7542661
Download Sequence
A.thaliana
AGI-codeAT3G18660.2
Descriptionplant glycogenin-like starch initiation protein 1
TAIR curator summaryPlants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch.
Alias[GUX1][PGSIP1][glucuronic acid substitution of xylan 1][plant glycogenin-like starch initiation protein 1]
Gene coexpression
MR
MR Locus Description
36.1109 Ahg478762
40.1123 Ahg947825
44.3396 Ahg487097 laccase 11
54.4977 Ahg473308 F-box associated ubiquitination effector family protein
69.2098 Ahg943869 glycosyl hydrolase 9B18
72.952 Ahg337527
81.8291 Ahg932542 RNI-like superfamily protein
82.6136 Ahg479659 Mannose-binding lectin superfamily protein
88.8819 Ahg481945 LOB domain-containing protein 13
92.7685 Ahg322297 galacturonosyltransferase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression