| Annotation |
|---|
| Description | jgi|Araly1|479466|fgenesh2_kg.3__2167__AT3G19510.1 |
| Sequence |
TTCTCAATCC TCGCGGGACA TTTATCGGGC GAGGGAAAAA GGAATCTACT AGTATTTAAA ACCTTGCTGA TTTAGAAACG CCTGAGTGCA TTATCTTCGA GGAAATGCAT AGAGCAGCCA GTAAACGGTT AACTAGGAGT AGTGGATCTG GTTTGAAGCA GACAAATGTA GAGACTAATC CAACTGTTGA CAAAGTATCT GAACAAGGCC AAAATTCAGA GGCAGGGAGT CACATGCCAA ATGATGCAAA TGAAAATGGA CATTTGCATC ATGATATTAT GGAAAATGGA AAGGGGAATG AACAACTGAA ACCAACCCCT CAAACCGGGA AGAAGAGATC TAGTACTAAT ACCAAAATTT CAGGGTCGCA TCGTGAACTT GTCATTGGTC TTCCTTGCCA CGGGCAATTT GAAATCCATC GGTCCAGGTC ATCTACGAGT TCGAAGAGGT TAGGAGGAGG TGGAGAAAGG AATGTGTTGT TTTCAAGTCA CAAGGGAGCT CAGAGATCTA AGGAAGATGC TGGATCATCT TCGGTTGCTG CTAATTCCAC ACCTGTAGGT CGACCAAAGA AAAGGAATAA GACTATGAAG AAAGGAGAAG TTAGAGAAGA TGATGAGTAC ACAAGAATCA AAAAGAAACT TCGATACTTT CTAAACCGGA TTAGCTATGA GCAAAACCTA ATTGACGCCT ATTCTTTAGA AGGCTGGAAA GGTTCAAGCC TGGAAAAGAT AAGGCCAGAG AAAGAGCTTG AACGAGCCAC AAAGGAAATT TTGCGGCGCA AGCTTAAAAT TAGAGATCTT TTTCAGCACC TTGACACACT CTGTGCTGAA GGAAGCCTTC CAGAGTCTTT ATTTGATTCT GATGGAGAGA TTTCTAGCGA GGATATCTTT TGTGCAAAAT GTGGTTCAAA GGACTTGTCT GTTGATAATG ATATCATACT ATGTGATGGG TTTTGCGATC GAGGCTTTCA CCAATACTGT CTTGAACCAC CTCTGCGGAA AGAAGATATT CCTCCGGATG ATGAGAGTTG GCTATGCCCC GGATGTGATT GCAAAGATGA CAGCTTGGAC TTGCTTAATG ATTCTTTAGG GACAAAACTT TTGGTCAGCG ACAGTTGGGA GAAAATATTT CCTGAGGCTG CAGCAGCGTT GGCTGGTGGA GGTCAAAATC TTGACTGTGA TCTTCCTTCA GATGATTCTG ATGATGAAGA GTATGATCCA GATGGTTTGA ATGATAATGA AAATGATGAA GATGGCAGTG ATGACAATGA AGAATCTGAG AACGAAGATG ATAGTTCTGA TGAATCTGAA TCTACATCTG CATCTGACAA AATGATTGAG TCATTTAAAG AAGGGAAAGA TATAATGAAA GATATAATGG CCCTTCCATC TGATGATTCT GAGGATGATG ACTATGATCC TGATGCCCCG ACTTGTGATG AAGATAAAGA AAGTTCAAAT TCTGATTGTA CATCAGACTA TGAAGATCTT GAAACTTCTT TCAAAGGAGA TGAGTCTAAT CAGCAAGCTG AAGATACACC ATTTGAGGAT CCTGGCAGAC AGACGTCTCA GCTCCCGTGT GATGCAATTT TAGAGTCAGA TGTTGGGCTT GATGATGGTC CTGCCGGTGT ATCCAGAAGG AGGAATGTTG AAAGACTGGA TTACAAAAAG TTGTATAATG AGGAATATGA CAATGTTCCG ACTTCGTCAA GTGATGATGA CGATTGGGAT AAAACTGCAA GAATGGGAAA AGAAGATTCC GAGTCAGAAG ATGAAGGGGA CATTGTACCT CTGAAACAGT CTTCAAATGC AGAAGATCAT ACTTCTAAGA AACCTAGACG GAAGTCGAAA AGGACAGATA AAAAGGATAC CTTGGAAGTG CCACAAGAAT GTCCTGGAGA AAATGGTGGT TCTGGTGAAA TTGAAAAAAG CAGCTCTTCA GCAAATAAAC AGACAGATCC CAAAACTCAG AGATTATACA TATCTTTTCA AGAAAATCGA TATCCAGACA AAGCCACGAA GGAGAGCTTA GCCAAAGAGC TACAAATGAC AGTTACGCAA GTTAATAACT GGTTTAAGAA TAGGCGTTCG TCGATAAACA GCAAACCTTT AGTTTCTGAG GAAAATGTCG AGAAGTTAAA AACAGGTAAG GAAGGTGAAT GTGAGACATC TGTTGCTGGA AGTAGCGTAC AAACTATGGA AACTGAGTCA GTTGCAGAGA ATAAGAGCAG GGCATCGGAA TCAACCAATA CTGGATCGCG GAAAAGAAGA AGAAAGTAAA TTTTAGATTC AATCATGAAG GTTTTAGATC TAATGCAAGG ACATAAATGA ACACATACTT CCCAAAACCC CAAGATATGA AGACATCAAA CCCTGCAAAG CATCGGGTTT GTTCAGTTGT TTGTTTCGCA TTTTTGGGGT ACCTCGAATT TGAGGCAAAA GAAAGAAAGA TTTTCTTCAA AATTGGATGA TATGTTCATT TTTAACGGTT AATATGAAAG TTTTTGTTAT TTCCAACTAG AGAGATGTTT TGACATAAAT TGTTTTGGTT TCTGTAATCG ATAGAGACCG GTTTAAGA |
| Length | 2578 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 7948528.. 7952273 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G19510.1 |
| Description | Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain |
| TAIR curator summary | Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains. |
| Alias | [HAT3.1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.4642 |
Ahg338905 | DNA LIGASE 6 |
| 17.4929 |
Ahg495012 | SIN-like family protein |
| 20.7123 |
Ahg491042 | |
| 24.7184 |
Ahg894331 | Transducin/WD40 repeat-like superfamily protein |
| 29.5804 |
Ahg329122 | zinc finger WD40 repeat protein 1 |
| 33.9117 |
Ahg940129 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
| 34.8138 |
Ahg888419 | |
| 36.5787 |
Ahg941230 | Alkaline-phosphatase-like family protein |
| 41.3521 |
Ahg315285 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain |
| 43.0813 |
Ahg937728 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|