Detail



ID : Ahg937728

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937728|scaffold_501919.1
Sequence
GTTTGATTAG GTTTTAATCT AGATGAAAGC TTTGAGAAGG ATTCAAACGA CGTCTTCGTC TTCTAATCCT TCATCGCCAT TATCATCTCC TCCTTCTTCA TCATCTTCGT GGATCCAAAT ACGTTCTGCT CTCTTCGTTG TTGCTTCTTC ATCTCCTGCG TCTTGTTCTT CTGATCGGCC TCGTCTTAAA TCACCATGGT CTCGGAGGAG AAGGAAAAGG CCTCTCAGAC CTCAGCAATG GAAGAGATTT TTTACACCTG ACGGTAGACT GCGGAATGGA GGAGTGGATT TGTTGAAGAA AGTTCGGAGT AGAGGTATTG AACCGAGCAT TCGGCTGGAG GTGTGGCCAT TCCTTCTTGG AGTGTATGGT TTTAATAGTT CTAAAGAAGA GAGAGTCAAT ATAAGAAACC GGAGAAGAAA GGAGTATGAG AGACTACGTA GGCAGTGCAA ACGGCTTCAA AAACACAATA ACGGGACTCG TAAGTTAAAC ATGGGCAGTG AAACTATGGA AGATGAGTAT GATTGGCCTC AAGTTCAAGA CACTGACAGT TCATGTTCTG ATGAAGTTGT CAGTGCCCGT GAGTCTCTCT CGAGTGATGA AGACATCACT GAAGATATTG GGTACATGAG TGAAGTTTCA TGTACAGTTG AGAGGGATGA CGGCAGTAGT TCAAGACGAA TCACCAATGC TACTATCTCT ACACTAAATT CCGAGTCATC AGATTCAGAT TCTTCAAATG GGAGTGAAGT GGTACAGGTC TTTCAATCTT CTGCTACTCC GGATGTGAAT AGTGCATATC CAGCCAGCTC ATCTATCCCC CGGACAGAAG AGGATTTTGT GACGTGGCAG CGTATTATTC GTCTAGATGC TGTGCGTGCT AATTCAGAGT GGACCCCCTA TTCTCCATCC CAGGCAGTTA TATCCGAGGA CAGAGCATGT CGTGCCGCTG AAGCGGTTGG GTTAAAAGAT TACAATCACT TGGAACCATA CAAAATATTT CAAGCTGCAC GGCTAGTTGC TGTTCTTGAA GCGTATGCTT TATATGACCC TGACATCGGG TATTGCCAAG GAATGAGCGA TCTTCTCTCT CCTATACTCT CTGTAATCCC TGATGACCAT GAAGTCTTTT GGTGCTTCGT CGGGTTCATG AAGAAAGCGC GTCATAATTT CAGACTAGAC GAGGTTGGAA TCAGAAGACA ACTCAACATA GTCTCAAAGA TAATCAAATC TAAAGACTCT CAGCTTTATA GGCACCTGGA GAAACTCCAA GCCGAAGACT GTTTCTTTGT ATATAGAATG GTGGTTGTGA TGTTCAGACG GGAGCTGACA CTCGATCAGA CGTTATGTCT ATGGGAAGTA ATGTGGGCAG ATCAAGCTGC AATCAGAGCC GGGATGGGAA AATCCGCATG GAGTAGGATA AGGCAACGTG CACCTCCCAC GGATGATTTG GTGCTCTATG CAATAGCGGC CTCAGTGTTG CAAAGAAGGA AACTTATAAT AGAAAAGTAT AACAGCATGG ATGAGATTTT AAGGGAGTGT CAAAGTATGG CAGGGCAATT AGATGTGTGG AAGCTCCTGG ATGATGCACA TGACCTCGTC GTTACTCTAC ACACCAAGAT TGAACATTCA TTCTCATAAA ATTTTCTCTT TTCTTCCGCG 
Length1660
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13715795.. 13718141
Download Sequence
A.thaliana
AGI-codeAT3G49350.1
DescriptionYpt/Rab-GAP domain of gyp1p superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
37.1483 Ahg480191 Nodulin MtN21 /EamA-like transporter family protein
43.0813 Ahg479466 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
55.4977 Ahg486155 Protein kinase superfamily protein
56.3116 Ahg351609 Protein of Unknown Function (DUF239)
62.0886 Ahg483400 NAC domain containing protein 42
63.8749 Ahg477955 myb domain protein 108
64.8537 Ahg470814 Histone superfamily protein
70.1213 Ahg482320 Integrase-type DNA-binding superfamily protein
71.8401 Ahg329122 zinc finger WD40 repeat protein 1
84.8057 Ahg933547 high-level expression of sugar-inducible gene 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression