| Annotation |
|---|
| Description | jgi|Araly1|479487|fgenesh2_kg.3__2188__AT3G19700.1 |
| Sequence |
ATGATGTTCC GGCGATTATT TATCGTTCGC CTTCTCTTTT TAATTCCACT GGCTTCATCC AGATCCAACC ATAGTCAAGA AGTAGATACT CTTCTCAAAC TGAAATCCAC CTTTGGAGAA ACAATATCCG GCGACGTCTT CAAGACCTGG ACTCACCGGA ACTCGGCATG CGAATTCTCC GGAATCGTAT GCAATTCCGA CGGAAACGTC ACCGAGATCA ATCTTGGAAG TCAGAGTTTG ATCAATTGCG ACGGCGACGG TAAAATTACA GATCTTCCTT TCGATTTAAT CTGTGATTTG AAGTTTTTGG AGAAGCTTGT TCTAGGAAAC AACTCCTTGA GCGGCCGGAT TAGTAAGAAT CTCAGGGAAT GTAATCACCT GAGATACTTA GACCTCGGCA CCAACAATTT CTCTGGTGAG TTTCCGGCGA TTGATTCATT ACGATTGCTC AAGTTTTTGA GCTTAAACGG TTCTGGAATC TCTGGAATAT TCCCATGGAG TTCTCTAAAA AACCTCAAGA GATTAAGTTT CTTAAGTGTT GGAGATAACC GATTCGATCT GCATCCATTT CCTAAAGAGA TTCTAAATCT CACTGCCTTG AAAAGGGTTT TTCTGAGTAA TAGCAGCATC ACCGGTAAGA TTCCAGAGGG AATCAAGAAC CTTGTTCGTC TACAAAACCT TGAGCTCTCT GATAATGAAA TCTCTGGTGA AATTCCAAAG GGGATAGTTC ATCTCAGAAA CCTAAGGCAG CTTGAGATTT ACAACAATTA CTTGACTGGT AAGTTACCAT TCGGGTTTCG GAATTTGACG AATTTGTGGA ATTTCGACGC CTCTAACAAC TCCTTAGAAG GTGATTTGTC AGAGCTGAGG TTCTTAAAGA ATCTTGTTTC TCTTGGATTG TTCGAAAACC TATTGACCGG TGAGATTCCA AAAGAGTTTG GAGATTTCAA GAGTTTAGCT GCTTTGTCTC TTTACAGAAA CCAACTTACT GGGAAGCTTC CGAACAGACT CGGATCTTGG ACCGGTTTTA GATACATCGA CGTGTCTGAG AACTTCTTGG AAGGTCAGAT TCCTCCTGAT ATGTGCAAGA AAGGCGCAAT GACGCATCTT CTGATGTTGC AGAACAGATT CATAGGACAA TTTCCAGAGA GCTATGCTAA ATGCAAGACT CTGATTCGTC TTCGTGTGAG TAACAACTTT CTCTCTGGTG TGATTCCTTC AGGGATTTGG GGGCTTCCTA ATCTCCAGTT TCTTGATCTT GCTTCAAACC GTTTTGAAGG AAACCTCACT GATGATATTG GCAATGCCAA GTCTCTTGGC TCTTTGGATT TAAGCAACAA TCGATTTTCA GGTTCTCTAC CGTTTCAGAT CTCAGGAGCT AACTCGTTAG TGTCGGTTAA TCTTCGCATG AATAAGTTCT CCGGGATAGT TTCTGACTCT TTTGGTAAGC TTAAGGAGCT TTCAAGTCTC TATCTTGATC AGAATAATCT ATCAGGTGCT ATACCAAAGT CACTAGGCTT ATGCACATTT TTGGTGTTTC TAAACCTTGC TGGAAACTCA CTCTCTGAAG AAATCCCGGA AAGTTTAGGA TCTTTACAGT TATTGAATTC TCTGAATCTG TCAGGAAACA AACTGTCAGG AATGATTCCT GTTGGTTTAT CGGCTCTGAA GCTAAGCTTA CTTGACTTAT CCAACAACCA GCTAACTGGT TCTGTTCCTG AATCTCTCGA AAGTGGAAAC TTTGAAGGAA ATTCAGGGCT ATGCAGCTCA AAGATCGCAT ATCTTCATCC ATGTCCGCTT GGAAAACCTC GCAGCCAAGG GAAGAGGAAA AGTTTTTCTA AGTTCAACAT TTGTTTAATC GTTGCAGCGG TACTTGCTCT GTTTTTATTA TTCAGTTACG TGATCTTCAA GATAAGACGG GATAGGTCGA ATCAAACGGC TCAGAAGAAG AACAATTGGC AAGTGAGCTC TTTTCGGTTA CTTAACTTTA ACGAAATGGA AATTATTGAT GAGATCAAGT CAGAGAATCT CATAGGCAGA GGCGGTCAAG GGAATGTTTA CAAAGTAACT CTAAGAAGCG GTGAAACACT AGCCGTTAAA CACATCTGGT GTCAGTGTCA GGATAGTCCC TGCGAAAGCT TTAGAAGCTC GACGGCAATG TTAAGTGACG GCAACAACAG AAGTAAGAGC CGGGAATTTG AGGCAGAAGT CGGGACGCTA AGCAATTTAA AACATATAAA CGTTGTGAAG TTGTTCTGCA GCATAACGTG TGAGGATAGT ATGCTGCTTG TATATGATTA TATGCCTAAT GGAAGCTTGT GGGAGCAGCT GCATGAGCGT CGTGGTGAGC AAGAGATTGG GTGGCGTGTG AGACAAGCAT TAGCTTTAGG AGTTGCTAAA GGGCTGGAGT ATTTGCACCA TGGGTTAGAT CGGCCGGTGA TACATCGGGA CGTGAAGTCC AGCAATATAT TGCTTGATGA GGAGTGGAGA CCGAGGATTG CTGATTTTGG ATTGGCTAAA ATCATTCAGC CTGATTGGGT TCAACGAGAT TCCTCGGCTC CTCTTGTTGA AGGAACTCTT GGTTACATTG CCCCCGAATA CGCGTATACC ACCAAAGTGA ACGAGAAGAG TGATGTGTAC AGCTTCGGGG TGGTGTTAAT GGAGTTGGTA ACAGGGAAGA AGCCGGTGGA GACAGAGTTC GGCGAGAACA GTGACATAGT CATGTGGGTT TGGAGCATAA GCAAGGAGAT GAACAGAGAA ATGATGATGG AATTAGTCGA TCCGAGTATA GAAGATGAAT ACAAGGAGGA TGCTCTTAAA GTTTTGACCA TTGCTTTATT ATGCACGGAC AAGTCTCCTC AGGCTAGACC GTTTATGAAA TCAGTGGTTA GTATGCTAGA GAAAATAGAG CCTTCCTACA AGAACAATGG AGAAGCAAGT TACGATGAGA GTGCTAATGA TGAGATTGCT AAAGTTGTAT AACTCATATT ATTAATCGAG CTAAGGCTCA AGAATATTAA ATTCTTGATT GGTTTTATAA TTATACAAAA TTCTTAAGAG AAAGATTCTA CGACCAGTTT TGTATCATCT ACGTGGACAA AAAAAAGCAA AAAGATGAAG CAAACCGTAG TTATTAAATA ACTTACAGAC CAAATTTTAT AAAATACATT GTAACGACAT GATATGCATG ATCATGATGA CAAACACAAA GATCAGAGAC ATCTTCAGAT GTTTCTTACA TATGTTTTGT ATACACACAC ATCAAGTTAC AGTTTCAAGA TTCAACCCTG GTGGTAACGG TCAATCTCCA CCGTCCATCC CTTGGTATCC TCGACCCGAC CCGTCTGGAT ATCATTTAAC G |
| Length | 3361 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 8046272.. 8049893 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G19700.1 |
| Description | Leucine-rich repeat protein kinase family protein |
| TAIR curator summary | Encodes leucine rich repeat (LRR) kinase. Iku2-3 identified in a screen for mutants with abnormal endosperm. Sporophytic recessive mutants have reduced embryo and endosperm size. Seed size is also reduced and the shape is abnormal suggesting an interaction between the endosperm and cell elongation in the integuments. |
| Alias | [IKU2][HAIKU2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg927551 | aspartate kinase 3 |
| 4.12311 |
Ahg477565 | glutathione S-transferase F11 |
| 4.47214 |
Ahg929873 | branched-chain aminotransferase4 |
| 4.89898 |
Ahg326599 | 2-isopropylmalate synthase 2 |
| 6 |
Ahg941819 | methylthioalkylmalate synthase 1 |
| 6.7082 |
Ahg920545 | cytochrome p450 79f1 |
| 8.12404 |
Ahg941820 | 2-isopropylmalate synthase 2 |
| 8.94427 |
Ahg490020 | bile acid transporter 5 |
| 9.16515 |
Ahg332580 | flavonol synthase 2 |
| 9.38083 |
Ahg488253 | isopropylmalate dehydrogenase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|