Detail



ID : Ahg479664

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479664|fgenesh2_kg.3__2365__AT3G21430.2
Sequence
CAATCGCTCC TTCGATCGCT CAAAACCCGC AGAAGCTCTG ATCTGTTCAT ATTCCGATCT CTTCCCGGAT TTCTCCAATT TCTCTCTGTA ATTTATTCTT CAAGTCCCGG CGATGGCTTC CAAGTGATTT TGGATTCTTG TAGGTAACAG AAGAACTTAA CTTATGGCGC CCTCAAGATC AAAGAAATCT AAGTACAAGA AAAAGCCCCG TGCCAAAGCT GTTTCTCCTC ACAAAGACGA AGATAGTATG AGCAAAACCA AACAACGGAA GAGGAAGCTG TCAGATATGT TAGGTCCTCA GTGGAGCAAG GAAGAGTTGG AGCGCTTTTA TGAAGGATAC CGCAAATTCG GAAAAGAATG GAAAAAGGTG GCTGCATTTG TACATAGCCG TTCTGCAGAA ATGGTAGAGG CCCTATACAC TATGAATAAG GCTTACTTGT CTCTTCCGGA AGGCACTGCT TCTGTGGTTG GCCTAAATGC AATGATGACG GATCACTACT CTGTTTTGCA TGGAGGAAGT GACAGTGAGC AGGAAAACAA TGAAGGTATT GAAACTCTGA GGTCAGCCCC TAAGCGCTCT AGAGTAAAAT CCTCAGATAA TCCCTCTATA GGACTAGAGG GTCTGTCTGA CCGCTTGCAA TTTAGGTCCT CCTCAGGCTT CATGCCGTCA CTGAAGAAGA GACGTACTGA GACTATGCCT CGTGCTGTTG GAAAAAGGAC ACCTAGAATT CCTATCTCAT ATACCCTTGA GAAGGATACT AGGGAAAGAT ATTTATCACC TGTTAAGAGA GGTCTAAATC AGAAGGGGGA TGATACTGAT GACGATATGG AACATGAGAT AGCATTAGCA TTGGCTGAGG CTTCACAACG AGGTGGCTCT ACAAAGAATT CCCACACACC AAATAGAAAA GCAAAGATGT ACCCCCCTGA TAAAAAGGGT GAAAGAATGC GTGCTGATAT TGACTTGGCG ATTGCCAAGC TTCATGCCAC TGATATGGAA GATGTCCGAT GTGAACCAAG CTTAGGAAGC ACTGAAGCTG ATAATGGGGA TTATTCTGGA GGTAGAAATG ACTTGATGCA TGGAGAAGGT TCTAGTGCCG TGGAAAAGCA GCAAAAAGGA AGAACATACT ATAGGAGGAG ATTAGGCATT AAAGAAGAAG ATGCAAAAGA AGCCTGCAGT GGTACAGACG AAGCACCAAG CTTAGGGGCT CCCGATGAGA AATTTGAACC AGAAAGGGAT GGGAAGTCTT TGAAATTCAC ATATAAAGTT TCAAGGAGAA AAAGTAAAAA AAGTCTCTTT ACTGCAGATG AAGACACAGC ATGTGATGCT CTCCAGACGC TGGCAGATTT ATCGCTGATG ATGCCTGAAA CTGCCACAGA TACTGAGTCA TCAGTTCAAG CTGAGGAAAA GAGAGCTGGA AAAGCTTATG TTTCAGATTT TAAAGGGACT GATCCAGCAT CCATGTCTAA AAGTAGTTCT CTTAGAAACT CCAAACAGAG AAGATCCGGC ACCAATGACC TTTGTGATAC TGAACCCGAG CGAAAGAGTC CAAGTAGCTC TTTAATCCGA AAGAGACGGC AGAAAGTATT ACCAGCTAAA GTAAGAGAAG ATGTTCTTAA AGATGAGCTT GCTGCAAGCT CAAAAGTCAT AGAGCCTAGT AATAACAAGG GAATAGGTGA GGAAAATAAG CCTGTTGGTA GAGGTAAACG GTCCGCAAGT ATTCGAAACT CACATGAAAA GAAGTCTGTC AAACCTCATG ATCGTACTTC GTCAAGTAAC AACATAGTAG AAGAAGATGA GTCAGCTCCA TCAAATGCAG TCATTAAAAA ACAAGTTAAC TTGCCAACTA AAGTTAGGAG CAGAAGAAAG ATAGTAACTG AGAAACCTCT AACTATTGAT GACGGGAAAA TTTCTGAGAC TCTAGAGAAG TTTTCGCATT ACACATCTAG TTTCCGAGCA CGAAGATGGT GTCTTTTTGA GTGGTTCTAC AGTGCAATTG ACTATCCATG GTTTGCCAGA CAAGAGTTTG TTGAGTATTT GGATCATGTA GGGTTGGGTC ATGTTCCTAG ATTAACTCGC GTTGAATGGG GTGTCATAAG GAGTTCTCTT GGGAAACCGA GGCGATTTTC TGAACAGTTT TTGAAGGAGG AAAAAGAAAA GCTATACCTA TACAGGGACT CTGTAAGAAA ACATTATGAT GAACTAAACA CGGGCATGAG GGAAGGACTT CCAATGGATT TGGCCCGGCC TCTTAATGTT TCACAGAGAG TCATTTCCCT GCATCCAAAG TCAAGAGAGA TTCATGACGG CAGTGTCCTA ACTGTTGATC ACTGTAGGTA CCGGATTCAG TTTGACCACC CTGAATTAGG GGTAGAATTT GTTAAGGATA CTGAATGCAT GCCACTGAAT CCTCTAGAAA ACATGCCAGC ATCGCTGGCA AGGCACTATG CTTTCTCAAA TTATCACATT CAGAATCCCG TTGAGGAGAA AATGCATGAG CGGGCAAAGG AAAGCATGTT GGAAGGATAT CCCAAACTTT CTTGTGAGAC TGGCCATCTC TTACCCTCAC CAAATTATAA CATTAGCAAT TCACTAAAGC AGGAAAAGGT AGATATCTCA AGTTCAAATC CACAAGCTCA AGATGGAGTC GATGAGGCTC TTGATTTACA ATTGTTTAAT TCTCAGCCCT CAAGTATTGG ACATATCCAG GCAAGAGAAG CTGATGTCCA AGCTCTTTCT GAACTAACAC GTGCGCTTGA CAAGAAGGAG CTAGTTTTGA GGGAGCTAAA ATGCATGAAC GACGAGGTTG TGGAAAGTCA GAAAGATGGA CATAATGCTC TGAAGGATTC TGAATCTTTT AAGAAACAAT ATGCAGCAGT TCTCTTTCAG CTAAGCGAAA TCAATGAGCA GGTTTCATTG GCACTTCTTG GCTTGAGGCA ACGAAATACT TACCAGGAGA ATGTACCATA TGCATCAATA AAACGCATGA ATAAATCAGG GGAACCTGAT GGTCAGTTGA CCTACGTAGA CAATTATGTA TCTGACACTA ATGGATTCCA TGTGTCTGAG ATCGTCGAAA GTTCTAGAAT AAAAGCACGG AAAATGGTAG ACAGAGCTGT ACAGGCATTG GCATTACTGA GGAAAGACGA AAATAATAAT GTAAATATGG AAGAAGTCAT TGATTTTGTA AATAATCAGC TCTCAATAGA TCAAACAGAA GGATCATCAG TCCAGCAAAC ACAAGGTGCC CAGGATCAGC GCCTTCCATC TACACCAAAT CCACCTAGCT CAACTCCTGC CAATGATTCC CACCTAAATC CACCCGATCA AAATGACCTG CAAATCCCGT CTGAACTTGT GTCCCGATGT ATGGCTACAT TGCTTATGAT TCAGAAATGT ACAGAGAGGC AATTCCCACC AAGTGAAGTG GCCCAGGTTC TAGACTCTGC GGTGGCGAGT TTACAGCCTT GCTGCTCACA AAACCTTCCT ATCTATACAG AGATTCAGAA GTGCATGGGA ATCATAAGAA ACCAGATTCT AGCCCTCGTA CCCTCCTAAA GTAAGACTCC TAAAACCATA ACTTTAACCT TTGTGTCTCT TCATAGTGCT TGTTTCTCTT GTAAAATCCC ATATCTCCTT ATAGGAAATC CTTTTATATA TACCTCATTT ATTTGGAGTG ACTCACAAAA CTTTTTCGAT TTCACATTTA TTTATATGTA ACACATCATT TGTT 
Length3734
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8954316.. 8963286
Download Sequence
A.thaliana
AGI-codeAT3G21430.2
DescriptionDNA binding
TAIR curator summary
Alias[ALY3][ATALY3][ALWAYS EARLY 3][ARABIDOPSIS THALIANA ALWAYS EARLY 3]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg478986 Regulator of chromosome condensation (RCC1) family protein
3.4641 Ahg942565 F-BOX WITH WD-40 2
4.58258 Ahg471734 SNARE-like superfamily protein
9.05539 Ahg496698 Ras-related small GTP-binding family protein
9.16515 Ahg325480 vacuolar protein sorting-associated protein 20.2
11.4018 Ahg473842 RING/U-box superfamily protein
12.8062 Ahg913497
12.8452 Ahg935153 multiprotein bridging factor 1A
13.5647 Ahg947562 RING/U-box superfamily protein
14.0712 Ahg474438 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression