| Annotation |
|---|
| Description | jgi|Araly1|479789|fgenesh2_kg.3__2490__AT3G22780.1 |
| Sequence |
ACACTGTTTC GCACCGGCGC GGACAAAGTT TTTTTTTTTT TTTTTTCGAA ATCCAACAAC AACCCTAGAT TGAAAAAAAC AAAAAACAGT GTCTGCATAG AGGCAATGTA GATTTGATTT TTGCTGGAAA ATGGACAAAC CTCAGAAGAA TCCTACTTCC CAGATCGGAA CTTCAACTCC CAAATCCAAA TTCGAGGATT CTCCAGTGTT CAACTACATA AGCAATCTCT CTCCAATTGA GTCTGTCAAA TCTATCTCCA CTGCTCAAAC GTTTAGCTCT CTGAGTTTCA CATCTCCTCC TCCTGTTTTC ACTTCTCCTC ACGTCAATTC TCATAGAGAA TCCAGATTTT TCAGATGTCA TAACTCTGTT GATCGTGCAA AGCACTTAGA GTCTTTAGAT GGATCTGCTA TTAAAGAAGA AGTTGTAGTA CCAGTTATTG AAGATCTAAA CAAAGAAGCT TCTTTGGAAG ATGAAGAAGA AACTTCCATT GAAACGTCTT ATGAGCTGCC ACAGATCTTG AAGTTTGGCA GCCAAACTCC TGAGGATAGT GATTCACCTT GCACTGAAGA TGTTGTTATT GAAGCTTCAT CTGATCCTCC TCGAGGAGAC GGTGGTTCGT CTTCCGAGGA TGTTAAGATG GGGCTTCAGA AGATGCTTGT TGTTCGGGAA GAGAAAGACA CTCCTGATTG TGGACGTTTG ATCTCAGATG CTACTGAGCT GTTAGTATTT AGATCTCCGA ATGATTCAGA GGCTTTTAGA TGTTTGGTGG ATAAAATATC GAGCTCGGAA AGACGGTTCT GCGCTGGTGT CAAGTCAACA AAGCGGCCTA AAATCACTGA AGATGTTCCA GCCAATGGAT CCAGTAATGA AAATGAGCCT TTAACTGTGC TTCCCAACGA GTCTGTCTTT AACTTGCATC GTGGTGGCAT GCGAAGACGC TGCCTTGACT TTGAGATGCC AGGGAAGCGG AAGAAAGATA TAGCTGATGA TCATCAATCT GTGTGTGACA ATAATGTGGC TGGTGAATCT TCCTCGAGAT GTGTTGTACC TGGTATTGGT CTTCATCTAA ACGCCGTTGC AATGTCTGCA AAGGACATTA ACATTAATCT CATACATGAC TATTCCATAT CTGGGGAGAT TCAAAAGAGT TTCTCAGGCT CTATTACTCC AATTCACTCC CAAGACACTG TGCAAGAAAC TTCGGACCAG GCAGAAAATG AACCTGTAGA AGAAATTCCC AAAGCATTGG CATTCCCAGA GCGTAAATCT GAACAAGCTG GAGAGGGTGA GTCATGTAAG CGATGCAACT GCAAAAAGTC AAAGTGTTTG AAGCTTTACT GTGAATGCTT TGCTGCTGGG GTTTATTGCA TAGAGCCATG TTCATGTATA GATTGCTTCA ACAAACCTAT CCATGAAGAA ACTGTTTTGG CTACCCGCAA ACAGATTGAA TCCCGAAATC CACTTGCATT TGCTCCTAAA GTCATCAGAA GCGCAGATTC CGTCATGGAA GCTGGTGATG ATGCAAGTAA AACCCCAGCT TCTGCACGAC ACAAACGCGG CTGCAACTGC AAGAAATCAA ACTGTCTGAA GAAATACTGT GAATGCTATC AGGGTGGAGT CGGCTGTTCC ATGAACTGTA GATGTGAAGG ATGCCAAAAT GTATTCGGCA GAAAAGAAGG GTCTTTACTT GTTATCATGG AGAGCAAACT AGAGGAGGAT CAGGAGACAT ATGAGAAAAG AATAGCAAAA ATTCAACACA ACATTGAAGT GTCGAAAGAA GTGGAGCAGA ACCCAAGTTC TGATCAACCT TCGACACCAC TGCCACCGTA CAGACATTTG GTGGTTCATC AGCCATTCTT GTCTAAGAAC AGACTGCCTC CGACGCAGTT TTTTCTTGGC ACGGGTTCTT CCTCTTTCAG AAAACCAGAT AGTGGTTTGA CACAATCACA GAATGAGAAG AAGCCTCTTG AAACTGTGGC TGAAGACAAA ACAGAGATTA TGCCTGAGAT TCTCCTCAAT TCCCCTATAG CTAACATCAA GGCCATCTCC CCCAACAGCA AGAGAGTCTC TCCCCCTCAA CCCGGCTCCT CAGAATCGGG CTCAATCCTA AGGAGGAGAG GTAATGGCCG GAAGCTGATA CTACGGTCTA TTCCAGCATT TCCTTCTCTC AACCCAAATC AGTGAATCAA AAACAATATG GTTAAGCTAT GGAAAAATTC TTGTATCTTT GTAATGTTCC AGATCCTGTT AGCCTATCAC TGTTTCCATA ACATAAGGCA TAAGCAACGT TCTTGTAAGA TACTTTCATT CTAGTAGGTA ATATAATATC ACATTCTAGT TCATAATCTT CCAGAAAGAA CATCCAAAAC TGGACTTT |
| Length | 2378 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | AT3G22780.1 |
| Description | Tesmin/TSO1-like CXC domain-containing protein |
| TAIR curator summary | putative DNA binding protein (tso1) mRNA, tso1-3 allele, |
| Alias | [ATTSO1][TSO1][CHINESE FOR 'UGLY'] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg486868 | Protein kinase superfamily protein |
| 15.4919 |
Ahg491633 | SHK1 binding protein 1 |
| 20.1742 |
Ahg488028 | Pyridoxal-dependent decarboxylase family protein |
| 35.8887 |
Ahg475143 | pentatricopeptide repeat 336 |
| 42.9884 |
Ahg491495 | TPX2 (targeting protein for Xklp2) protein family |
| 43.6463 |
Ahg493528 | glycine-rich RNA-binding protein 2 |
| 43.8748 |
Ahg941476 | alpha/beta-Hydrolases superfamily protein |
| 44.7661 |
Ahg479804 | Pyruvate kinase family protein |
| 45.5412 |
Ahg470815 | ribosomal protein L29 family protein |
| 46.1302 |
Ahg476678 | ornithine carbamoyltransferase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|