| Annotation |
|---|
| Description | jgi|Araly1|491633|fgenesh2_kg.7__1066__AT4G31120.1 |
| Sequence |
AGAAGAGATG CCGCTCGGAG AAAGAGGAGG ATGGGAGCGC ACCGAGTCCA GGTACTGCGG CGTTGAGACT GATTTCTCCA ACGATGTTAC TCATCTTCTC AACTTCAACA TTTCCACCGG CGGTTTTGAC TATATCCTCG CTCCTCTGGT CGATCCTTCG TATAGGCCGA GCTTGGTGGA AGGAAATGGT GTAGATACTC AGGTTCTTCC AGTCTCTGGC TCTGACTTAG TCTTGTCACC TTCTCAATGG AGCAGTCATG TTGTTGGAAA AATTAGTTCG TGGATTGACT TGGATTCTGA AGATGAGGTC TTGCGGATGG ATTCAGAAAC CACATTGAAG CAGGAAGTAG CTTGGGCTAC TCATCTCTCC TTACAGGCAT GTCTTCTTCC CACTCCTAAA GGGAAATCGT GCGCCAATTA TGCCAGATGT GTGAACCAGA TCTTACAAGG GCTGACTACC TTGCAGTTAT GGCTGAGGGT TCCACTGGTG AAGTCTGATG GTGATTCAAT GGATGATACC TCAGAGGGAT TGAATGATTC CTGGGAGCTG TGGAATTCGT TTCGTCTTCT TTGTGAGCAT GACAGTAAGC TGTCTGTTGC TCTTGATGTT CTGAGTACGC TACCCTCTGA AACTTCACTA GGGCGCTGGA TGGGAGAGTC TGTGAGAGCA GCCATATTAA GCACTGATGC TTTCTTAACA AATGCTCGGG GTTATCCTTG CTTGTCAAAA CGCCACCAAA AGTTAATAGC AGGATTTTTT GATCATGCTG CCCAGGTTGT AATTTCTGGA AAGCCTGTTC ATAATCTTCA AAAGCCTCTT GATTCTAACA CGGAGGGTAC AGAGAAGAAT CCGCTGCGGA TATATTTGGA CTATGTTGCT TATCTGTTCC AAAAGATGGA ATCACTTCCT GAACAGGAAC GCATCGAGCT GGGCTACAGG GATTTTTTGC AGGCACCCCT GCAGCCTCTT ATGGACAACC TCGAAGCCCA AACCTATGAG ACGTTTGAGA GAGACTCTGT TAAATACATC CAATATCAAA GAGCAGTTGA GAAAGCCTTG GTGGACAGAG TACCTGATGA AAAAGCATCC GAGTTGACTA CTGTATGTCT GATGGTTGTG GGGGCAGGAA GAGGACCCCT TGTGAGGGCA TCGTTACAGG CAGCAGAAGA AACTGGTCGG AAGTTGAAAG TTTATGCCGT GGAAAAGAAT CCTAATGCAG TTGTAACACT CCACAATTTG GTTAAGATGG AAGGATGGGA AGGCATTGTT ACGATAATAT CCTGTGACAT GCGTTTTTGG AATGCTCCTG AGCAAGCTGA TATATTGGTT AGCGAACTGC TGGGTTCTTT TGGAGACAAT GAACTTTCTC CTGAGTGTCT CGATGGAGCC CAAAGGTTTC TGAAGCCAGA CGGAATTTCT ATTCCATCTT CGTATACAAG TTTCATACAG CCTATAACAG CTTCGAAGCT TTACAATGAC GTTAAGGCAC ATAAAGATCT TGCACACTTT GAAACTGCTT ATGTTGTCAA GCTGCATAGT GTAGCAAAAC TTGCCCCTTC CCAATCTGTT TTCACATTTA CTCATCCAAA CTTCTCAACA AAAGCCAACA ACCAACGGTA TAAGAAGCTT CAGTTCAATT TACCAAGCGA CGCTGGCTCA GCTTTGGTGC ATGGATTCGC TGGCTATTTT GATTCCATCC TTTATAAAGA TGTTCATCTT GGGATCGAGC CTACAACAGC AACACCAAAC ATGTTCAGCT GGTTCCCAAT CTTTTTCCCA TTGAGGAAGC CTGTGGAGGT TCACCCTCGT ACTCCATTAG AAGTACACTT TTGGAGGTGT TGTGGTTCCT CAAAGGTTTG GTATGAATGG TCGGTGTCTT CACCTACTCC ATCTCCAATG CATAACACCA ATGGCCGTTC GTATTGGGTT GGCCTTTAGA TTAGGGACTT TGACTGATGA TGAAAAAGTT ATGTAATCTT ATTGTTCTGT ACTTTTATGT CACAAGAAAG ACCAATGTTT ACGAGTGAAT GAAAACTCTT TTGACCTTGT TAATGTTTGT ACTTTTTCAG AAATTTCATT GCACTTTTAA TACAGAGCTA TCTCTA |
| Length | 2106 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 4199515.. 4204128 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G31120.1 |
| Description | SHK1 binding protein 1 |
| TAIR curator summary | Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification. |
| Alias | [ATPRMT5][PRMT5][SKB1][PROTEIN ARGININE METHYLTRANSFERASE 5][SHK1 binding protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg491815 | ribosomal protein S15A E |
| 4.69042 |
Ahg484564 | carbamoyl phosphate synthetase A |
| 15.4919 |
Ahg479789 | Tesmin/TSO1-like CXC domain-containing protein |
| 15.6205 |
Ahg494908 | |
| 16.5227 |
Ahg475255 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 16.7332 |
Ahg491917 | prohibitin 1 |
| 19.4936 |
Ahg934136 | plastid developmental protein DAG, putative |
| 19.4936 |
Ahg952606 | plastid developmental protein DAG, putative |
| 20.8567 |
Ahg483042 | nuclear RNA polymerase D1B |
| 23.3666 |
Ahg489203 | Transducin/WD40 repeat-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|