Detail



ID : Ahg479837

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479837|fgenesh2_kg.3__2538__AT3G23230.1
Sequence
ATGGAGAGCT CAAACAGGAG GAGCAACAAC CAATCACAAG ATGACAAGCA AGCTCGTTTC CGAGGCGTTC GAAGGAGACC ATGGGGCAAA TTTGCAGCAG AGATTCGAGA CCCGTCGAGG AACGGTGCCC GTCTTTGGCT AGGGACATTT GAGACCGCTG AGGAGGCGGC ACGGGCTTAT GACCGAGCAG CCTATAACCT TAGGGGCCAT CTCGCTATAC TCAACTTCCC TAATGAGTAT TATTCACGTA TGGACGACTA CTCGCTTCGC CCTCCTTACG CTTCTTCTTC TTCTTCTTCT TCGTCATCGG GTTCTACTTC TACCAATGCG AGTCGACAAA ACCAAAGAGA AGTTTTCGAG TTTGAGTATT TGGACGATAG GGTTCTCGAA GAACTTCTTG ATTCAGAAGA AAGGAAGAGA T 
Length421
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9958153.. 9958573
Download Sequence
A.thaliana
AGI-codeAT3G23230.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Alias[AtERF98][AtTDR1][ERF98][TDR1][Ethylene Response Factor 98][Transcriptional Regulator of Defense Response 1]
Gene coexpression
MR
MR Locus Description
1 Ahg497440 Integrase-type DNA-binding superfamily protein
35.9166 Ahg932118 Protein of unknown function (DUF1278)
40.4228 Ahg937168
51.0979 Ahg924246 Protein kinase superfamily protein
65.1306 Ahg918906 Plant invertase/pectin methylesterase inhibitor superfamily protein
65.5134 Ahg470353 Zinc finger C-x8-C-x5-C-x3-H type family protein
82.3225 Ahg950383 Auxin efflux carrier family protein
87.9489 Ahg906745 polyol/monosaccharide transporter 2
94.7734 Ahg492079 seed storage albumin 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression