Detail



ID : Ahg479848

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479848|fgenesh2_kg.3__2549__AT3G23330.1
Sequence
ATGAGTTCAT CAAAAGCCCT AATCAAAACC CTGATTAAGA ACCCTACTCG CATCAAATCC AAATCTCAAG CTAAGCAGCT TCACGCGCAA TTCATCAGAA CTCAATCACT CTCTCACACA TCTGCTTCAA TCGTAATCTC AATCTACACA AACCTTAAAC TTTTGCACGA AGCTTTGCTT GTTTTCAAAA CCCTCGAGTC TCCTCCTGTT CTCGCATGGA AGTCAGTAAT CAGATGCTTC ACCGACCAGT CTTTATTCTC CCGTGCTTTG GCTTCGTTCG TGGAAATGCG AGCTTCTGGG AGATGCCCAG ATCACAATGT GTTTCCTTCT GTGTTGAAAT CGTGTACGAT GATGATGGAT TTGAGATTTG GTGAGTCTGT TCATGGGTTT ATTGTTAGGC TTGGTATGGA TTGTGATTTG TATACTGGTA ATGCGCTTAT GAATATGTAT GCTAAGCTTC TTGGAATAGA TAGTGTGAGG AAAGTTTTTG AATTGATGCC TAGAAAGGAT GTTGTGTCGT ATAATACTGT CATTGCAGGG TATGCACAAA GTGGAATGTA TGAAGATGCT TTGAGAATGG TTAGGGAGAT GGGAACTAGT GATTTAAAGC CTGATGCTTT CACTTTGTCT AGTGTGCTTC CGATATTTTC TGAGTATGTG AATGTTCTTA AGGGAAAAGA GATTCATGGG TATGTGATTA GGAAAGGGAT TGATAGTGAT GTATATATTG GGAGTAGTTT GGTTGATATG TATGCTAAAA GTGCTCGGAT TGAAGACTCG GAAAGAGTGT TTTCTCACTT GTATCGTCGG GATAGTATCT CGTGGAACTC GCTTGTAGCT GGGTATGTAC AGAACGGTAG ATACAATGAG GCTCTGAGAT TATTTAGGCA AATGGTGAGC GCAAAGGTTA GGCCAGGAGC TGTGGCGTTC TCAAGTGTGA TTCCTGCTTG TGCTCACCTA GCTACCTTGC ACCTTGGGAA ACAACTTCAC GGATATGTAT TAAGAGGTGG CTTTGGGAGA AATATATTCA TAGCTAGTGC ACTTGTCGAT ATGTACTCAA AGTGTGGAAA TATTCAGGCT GCTAGGAAGA TTTTTGACAG GATGAATCTA CACGACGAAG TATCATGGAC GGCTATTATA ATGGGTCATG CGTTACATGG TCATGGGCAT GAAGCAGTTT CGTTGTTTGA GGAGATGAAA CGGCAAGGAG TGAAACCAAA TCAAGTGGCC TTTGTTGCTG TACTAACGGC TTGTAGTCAT GTGGGGTTGG TAGATAAGGC GTGGGGATAT TTCAACAGCA TGACTAATGT TTACGGTTTA AACCAGGAGT TAGAACATTA TGCAGCTGTA GCAGATCTTC TAGGCCGTGC AGGGAAACTG GAAGAAGCAT ACGATTTCAT TTCAAACATG CGTGTTGAAC AGACGGGTAG TGTCTGGTCT ACCTTATTGT CTTCTTGCAG CGTTCACAAG AATCTTGAGC TAGCCGAGAA GGTAGCAGAG AAGATATTCA CAATTGATTC TGAAAACATG GGAGCTTATG TTTTGATGTG CAATATGTAT GCGTCTAATG GGAGATGGAA AGAAATGGCG AAACTGAGAT TAAGAGTGAG GAAAAAAGGA TTACGTAAAA AGCCAGCTTG TAGTTGGATC GAAATGAAAA ACAAGACTCA TGGGTTTGTT TCAGGAGATA GATCGCATCC GAGTATGGAC AGAATCAACG AGTTTCTTAG AGCTGTAATG GAACAGATGG AGAAAGAAGG TTATGTTGCA GACACAAGCG GCGTGCTTCA CGATGTAGAC GAAGAGCATA AGAGAGAGCT TTTGTTTGGA CACAGCGAGA GATTGGCTGT TGCATTTGGT ATCATCAACA CAGAACCTGG CACGACGATT AGAGTCACTA AGAACATAAG GATTTGCACG GATTGTCATG TCGCGATCAA GTTTATCTCG AAGATCACGG AGAGAGAGAT TATTGTTAGG GATAATAGCA GATTCCACCA TTTTAACCGT GGAAGCTGTT CTTGTGGAGA CTATTGGTAA 
Length2040
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10027505.. 10029673
Download Sequence
A.thaliana
AGI-codeAT3G23330.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.4936 Ahg896342 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein
28.9828 Ahg481754 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
30.8869 Ahg485308 F-box family protein
36.6606 Ahg888441 disease resistance protein (TIR-NBS-LRR class), putative
50.1597 Ahg891369 Family of unknown function (DUF577)
98.6813 Ahg336994 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression