Detail



ID : Ahg480065

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480065|fgenesh2_kg.3__2766__AT2G04100.1
Sequence
GAAGTCGTGC ATTCTTATCT CACACGTTCC AAGGTAAAGA AAGGATCGTT GACAAGAACT AAAGATCTCC GAGAAGATAA TGGAAGATCC ACTTTTATTG GAAGACGATC AGATAATCAC CGGAAGTCTT AAGCCGACGC CGACATGGAG AATGAATTTC ACGGCGGAGC TAAAGAACGT CAGCCGCATG GCGTTGCCTA TGGCCACCGT GACCGTTGCT CAATATCTAT TGCCCGTTAT CTCAGTCATG GTCGCCGGCC ACCGCAGCGA ACTCCAGCTC TCCGGCGTCG CTCTTGCCAC TTCTTTTGCA AACGTCTCTG GCTTCAGCCT CATGTTTGGT TTAGTGGGTG CACTTGAAAC TCTATGTGGC CAAGCTTATG GAGCAAAACA ATACGCGAAA ATCGGAACTT ACACTTACTC TGCAATAGTC TCAAACATAC CTATAGTTGT TCTCATATCG ATTCTCTGGT TTTATATGGA CAAACTCTTG ATTTCAATCG GACAAGATCC TGACATCTCC AAGGTAGCTG GTTCCTACGC GGTTTGTCTT ATACCTGCAT TGTTAGCTCA AGCGGTGCAA CAACCTTTGA ATCGGTTTCT CCAGACTCAG GGCTTGGTTC TTCCTCTTCT CTACTGTGCC ATCACCACAC TTTTGTTCCA TATATTCGTT TGTTTGGTTC TGGTTTACGC GTTTGGTCTT GGAAGCAATG GAGCCGCATT GGCTATTGGT TTGTCTTACT GGTTTAATGT CTTGATTCTT GCTTTATATG TGAGATTTTC AAGCGCTTGC GAAAAGACTC GGGGCTTTGT ATCCGATGAT TTCGTGTTGA GTGTCAAGCA GTTTTTTCAG TATGGGATAC CATCAGCAGC AATGACTACC ATTGAATGGT CGTTGTTTGA GCTCCTTATA TTATCCTCAG GACTCCTCCC AAACCCGAAA CTCGAGACCT CTGTTCTTTC CATTTGTCTT ACAACATCAT CTCTCCACTA TGTCATTCCA ATGGGTATCG GGGCGGCTGG AAGCGTACGG GTTTCAAACG AATTGGGAGC GGGGAATCCG GAGGTTGCTA GGCTGGCAGT GCTTACCGGT ATTTTCCTTT GGTTCCTAGA GGCTACCATT TGTAGCACAC TTCTCTTCAT TTGCAGAAAT ATCTTCGGGT ATGCCTTCAG CAACAGCAAA GAAGTTGTGG ACTATGTCAC AGAGCTATCT CCTTTGCTTT GTATCTCATT TATGGTTGAT GGATTTTCGG CAGTGCTTGG TGGGGTTGCT AGGGGAAGTG GATGGCAACA TATTGGAGCT TGGGCAAATG TGGTGGCTTA CTATCTCCTA GGAGCTCCGG TTGGACTTTT CTTAGGATTT TGGTGTCACA TGAACGGTAA AGGGCTATGG ATCGGTGTAG TGGTTGGGTC TACGGCGCAA GGAATCATAC TAGCTATAGT CACTGCTTGC ATGAGTTGGA ATGAGCAGGC TGCCAAGGCA AGAAAGAGAA TAGTTGTACG AACTTCTTCA TTTGGCAATG GACTAGCTTA AAAGGTTCTT TATTTCCATT TTTGAGACA 
Length1559
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12304311.. 12306482
Download Sequence
A.thaliana
AGI-codeAT2G04100.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.55 Ahg948640 microtubule-associated protein 18
35.2846 Ahg346167 receptor serine/threonine kinase, putative
47.4131 Ahg950073 C2H2 and C2HC zinc fingers superfamily protein
54.2218 Ahg477692 Kunitz family trypsin and protease inhibitor protein
56.2317 Ahg495065 ethylene response factor 110
58.2065 Ahg480324 AGD2-like defense response protein 1
64.5291 Ahg920442 Lactoylglutathione lyase / glyoxalase I family protein
65.7115 Ahg927555 WRKY DNA-binding protein 45
74.8331 Ahg489772 Peroxidase superfamily protein
78.1537 Ahg493004 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression