| Annotation |
|---|
| Description | jgi|Araly1|480269|fgenesh2_kg.3__2970__AT2G07682.1 |
| Sequence |
ACTTTGCGGC GTGCTCTCTG GGAGCAGTTG AGTAGCTTGG CATCTATGAT ATCTGATCCT TGGCTAATAG GTGGGGGGAC TTTCATTCCA TTCTGTGTAG TTCAGAGAGC CGGGGTGGCT CAGCTAGTGG TAATCGGCCG TGTCGTTTGA GTTGGTTCCA TTCCTCTAGT CTCTATGACA TGAAGTTCGT TGGTCCGAAG TTGACTTGGG CTCGCAAGGG TTTGCTGAAG CGTTTAGATA GAGCTACACT TGAGAGTCTT TCTATTACTT CCTTGCTTAC CTGGCTCACT TCGCAACAAA GAGAAGTTGT TTATTTGCTT GCTTAGCTAG AAGATGCCAA CTTCGTTCAC TTACGTCTCT CGTTTACTTG TTAGCTAGCC CTATTCCTCA CCTTTGCTTT GAGGGTATCT AAATAAAAAA AATATACAGT GGTGTGCTCG TTAGAGGATG CTTTTTTAGT TAGCTAAGCG ACTACCTTAG TTGAAGGTGG GAGGAGAGCA GCAAAGTCTC TTATCTTTCC AAAGAAGGCG GAAATCGAGA TGTGAGAAAA AGAATAGCTA TTCACTCTCC AAAGAAGCCC TCAAAATTCT TTCTAGCAGA TGTGAAGAGA GGATTGTTGA CAATTCAATA ACCACTGCAA TACCCTCTTA CGGAATGATC TCGGTGTTCT CGCTATGTCG TCAATCTCAG TATACGGAAA TGGTCTGACC AAGAGGCATC GATCTGGAGT GGGTCTTGCA TTGCCGGATG ACAGGAGCCC TTTACCTCCA CTCTTCAATT ATATCCATAC CAGGTGAACA CAGATGATCG ACCTTCAGTG CCTGGTCAAC CATTAAAGAA GAGAAGAGGA GCGGAACAAT GAGAAGGAGT TCGTAGCCCT CCAACCAGAA CTAATCAACC CGCCTCTTCA ACATCTCCAT TTCCCATTCC ATCTCTGGGA TCCAATGCTT CTTCACCGGG CCCGCCCGAT CCCCAGAACG TAAAATGGAA CCATACCGGA AACCGTTTGA TCAGGATAGA AAGAGCAAGG GGCTTTGTTT TCGTTGTGGT GACAAGTGGA ATCCTGGTCA CAGATGTAAG GGCAGAGAAT TCAAGTATAT GGCTGTGGAT GAAGGAGATG AGTTGGATGA GGCTGATGAA GCTGAAACAG GGAAAAAGAT AGAAGAATCA GATGAGGATG AAGTAAAGGA ATTACTCTGG TTGTCTTTGC GGTCGATGGC AGGTTTAACA ACTGAGAGAT CCATGAGGAT GAGAGGACAA ATTGCAGGAC AAGAAGTCAT TGTTTTAATT GATTCAGGGG CTACAAGCAA TTTCATAGCA GAGAGTGTAG CACATCGGTG TGGTCTGCAA ATCACAGAAA CTCGTGGATT TGGGGTTTCT ATTGGAAATG GTCAAGTCGT TCCAAGTGCC GGGAAATGCA GCGGAGTAGA GCTAACGGTC CAAGATGTGC AGATACGTGC GGACTTCTTC CTGTAACCAC GGATATAGTG CTGGGTTATG CGTGGTTGGC CACTCTGGGT GACACCAGAA TGAATTGGGG AAGACACACC TTGAGTTTCC GTAGGGAAGA TCAGTGGGTC ACCTTAGCAG GCGATCCGTC ACTGGTGCGA GCTCAAATCT CTCTCAATTC AATGGAGAGG GTAGTCAAAG AGGGAAGGAA GGCTTATCTC CTAGAGCTCA CCGCACTGTT TGCAGGAGGA ATTAAGACTC AAAATTTTCC TGAGGATGCT CAAGTGAAAC AGTTGTTGGA ATGGCATGAA AACGTGTTTG AGATGCCGCA AGGATTACCC CCAAAACGTG GCAGGGAACA TGCTATCAAC CTTAAGGAAG GAGCAGAACC AGTTAACATC CGTCCTTACC GGTATACATA TACTCAGAAG GACGAGATTG AAAAATTGGT TAGGGAGATG TTAGAAGCAC GGATCATCCA GCCGAGCATC AGTCCATATT CAAGTCCAGT TTTGCTCGTC CAAAAGAAGG ACGGAGGATG GCCTACGGCG CGTGGATTAC CGAGCCTTTT ACAAGCTCAC GGTACCAGAC AGGTACCCAA TTCCCGTGAT CGAGGAACTG TTGGATGAGT TACAAGGAGC TTCTGTATTC TCCAAACTCG ATCTCAAATC CGGGTACCAC CAAATACGTG TACGAGCCAC AGACGTGAAG AAAACTGCCT TTCGAACTCA CGAAGGGCAC TATGAGTTCC TGGTCATGCC ATTTGGGCTT ACCAACGCAC CAGCAACATT CCAATCCGTG ATGAACGATA TTTTCCGCAG GGAAGTTTGT GTTGGTATTT TTTGATGACA TACTAGTCTA TAGCAAGGGC ACGGAGGAAC ACATGAATCA CTTGGGAATG GTGCTCCAGA TTTGGGAACA ACACCAGTTT TATGCAAACA GAAAGAAGTG TGCTTTTGGA CAACCACAGA TTGCATATTT GGGACATATT ATATCGGGCG AAGGGGTGTC AGCTGATCCA GCTAAGTTAG AAGCAATGGT GGGTTGGCCA GAACCAAAGA ACACAACAGA ATTGCGAGGC TTCTTGGGCT TGACGGGGTA CTACAGGAGA TTCGTTAAGA ATTATGGGAA AATTGTGAGA CCGTTGACCG AGTTACTCAA AAAGAACAGT TTAAAATGGA CAGAAATGGC AGCACTAGCT TTCAAGGCTC TCAAAGGAGC AGTGACGACG CTTCCTGTTC TAGCCTTGCC AGATTTGAAG CTACCTTTTG TGACCCGCGT CGGGAAATGG AATTGGAGCT GTTTTATTAC AAGGGAACAG GCCTGTTGCG TATCTCAGCC AAGGGTTTTC TGAAAAGGGG AGCTTGAAAT CAGTGTACGA ACGAGAGCTC TTAGCAATAG TCTTGGCAGT CCAACGTTGG AGACATCAGG GCAACGTTTC ACGATACGCA CAGACCAGAA GAGTCTAAAG CACTTGCTGG AACAAAGGTT TGTCACCAAG GAACAACAGA GGATGGGCTA CCAAACTGTT AGGCTTGGAT TTTCTCATTG AGTATAAGCC GGGAACTGAA AATAAGGCTG CTGATGCGTT GTCAAGACGA GTGCAACCTG AGCGTCTGTT GGAACTTGTA TTCGCACCTC CTCCCTCTTT CGATGCAGCA GAATTACTAT CTCAAGTTGA AGCTGATCCG GAGTTAAGAA CTGTGTTACA ACAAGCCCGA GATGGAAAGA ACCTGGAATC TGGTTATACG GAAAAAAGAG GGGCTGCTAT GTAAAGATGG AAGAGTGGCG TCTCGAATCA GCCAAGCTTT CTCCCAATTT CTTCTATATT TTCATCTCTT TCTCTATTCT ACCGAGAAGA TCCATCTCGG GTCTTATCAG ATGGTATCAG AGCCTTCGGT CTTCTGACTG TGGGTATCCA ACGACGATTT CGACAATGGG TTTGGATAGT AACGATATAG CGCTGATCAG GCGGATTCTC GCTCGGGTGG AGCAGATGTT TTTTTCCATC GCATGACGAC GATGAAGAGA TCCGCCGATC CTGAAGCTGA GGAAGACCCA GATCCGTCGC TTGGGAAATT CATCGAGCAG GTGGTGAGCG GTCCAACTCA GAAGGGATTT CCTGCATCCG GAGCTTTTGC GACTCCTCGG GCAAGACGAT CTCGCGGTCC GAAAAGGTTT CTTGGCAAGC GCAACTACCG CAGGGCTCGG GCAAGAAAAC CAGGGAAGCG TGACAGAGCT CACTCGTCCA AGGTTAGATC TAGCGATGGC TCTACACGAC CTTCTGCGAG ATATGGTATG CGTTTCCGAT CTCCTACTTT GCCCTTGTGT TCTAGACCTC GGACATGGGA ATTTCTGCTT GATCTTGGTT ACGATAGTAT GTCGCTGAAG AGCACTCGTG TAGCGAGTGA ACGACCTTGC GATCCTGGAC GAGCTAACCA TGTGTGGGAG CCGGGTGGAT TATCGCCTGA ACAAGCTCAG TGGGACTGGG TAGGGAAGGT TTACAGTCGT GATAGAGTTC TGAAGCTAAT GGGAGAGCTT CATGAATTGG GTTTACAGGG AATCAGGAAG ACGGTAAGGA TCTTAGATTG TCAAGGATCT TCCTCATAAA CACGTTTCCG CTTGCAGCTG AAACAAGCGG AGAAGATGGG ACCAACGGGA TCAGCCACCA GGAAGTTAAT AAGATCTGAT TTTTGGCATC CTTTGATCCT GGAGGAACTT GTGCTGAAAA GTGAGTTCGT CAAAGAGCTC TGGCGAGGCA TTAGAGCTGT GAAGGGAAAG AAGGTTAAGA AGAGGAAGAA ACGGGAACCT AGCCTGCCAG CTTTGGAACC CCAGAATTTT CCCTGTGTTG GGGGGTTGGA GGTATGATTA GTAGGCTTAA TTATAAAGTT CTCGTTCAAC CAGAACTAGA TAAAGCTACA AGGGCAGTCT CTAGAATTAC TTACGGATTG GTTGCTGTTG GTAAAGCTGA TGGGTATAAT TTTGAGGTTG TGGATTGTGA TCAAGTTAAC TCCACTGACG AAGATAAGCT TGTGAGTTTC ATTGGATCTG GTGGGTGTCA AACACACTTT AAGAAGCAGC TAGTAGCAAG GGAGTTAGCA TTGTTTAATC CCGAAAAATC ATGAACCTAA GACTACCTCA TGACAAGGGA ATTCTAGTCT TTGCTGGTCA TAGAATTGCT CAAACCACAT TGTGAGATTG ATGCCATTTT GATAGAAATC GTCGGTATAT AAAGAGAAAG TTTGCGATGT AAGATGTGCT CTTACGAAGG AAAATAGGAT TGCTAACTTT TGCATCTATA TAAAATGAAA AGCAAGTTTT TGTATCAGGA AAGAGGCAAG GACAGATCCG CCGAAGAAGG ATCGGGGTTA GAACTAGTCT GAAGCTTAAG GCTTTTGCTA TTCAAGAAGG CTCTCCCTGC TGGCTCCATG TATGCTAT |
| Length | 4888 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 14438236.. 14443124 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G07682.1 |
| Description | transposable element gene |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.4018 |
Ahg475597 | |
| 13.9284 |
Ahg907865 | photosystem II reaction center protein B |
| 20.4939 |
Ahg475560 | photosynthetic electron transfer A |
| 24.3105 |
Ahg319380 | Nucleic acid-binding, OB-fold-like protein |
| 26.4386 |
Ahg475609 | photosystem II reaction center protein H |
| 26.4386 |
Ahg475557 | photosystem II reaction center protein H |
| 27.9821 |
Ahg475584 | ATP synthase subunit alpha |
| 28.6182 |
Ahg925574 | |
| 33.5857 |
Ahg931018 | |
| 37.4967 |
Ahg315554 | CemA-like proton extrusion protein-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|