Detail



ID : Ahg480322

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480322|fgenesh2_kg.3__3023__AT2G04470.1
Sequence
GGGGGAAGCT TTGCTTACCA ATAATTACAT CCTCAACATA ATACCGCATA AGGTGACTGG TAAGTCACCA CATGAACTTT GGAAAGGTAC AGTACATTCG TACAAATACC TGAAAGTGTG GGGGTGCCTA GCAAAAGTGG CTGTACCACC TCCTAAAAAA GTCACAATTG GTCCTAAGAC CATAGACTGT ATCTTCATCG GATATGCGCA TAATAGTAGT GCTTATCAAT TTTTGGTTCA CAAATCAGAT ATTCCAGATA TCAGTAAATA CATTTATGGA ATCAAGAAAT GCATCATTTT TTGAAGACAT TTTCCCTTGT AGGAAAGCTC AAAAACGAAC TCGTGAACAA CGAGATGCAG CAATCTCAGA AGCTGAGGAC AATACTTCGG GTACTATTAC TGTTGAAGAA ACAGAACCAA AAGAGCTCGC AAAGAGAAAT CTTTCGGTGA TGACTTCTTG ATGGCGTTTC TAGCTGAAAA CGTACCAAGA ACTTATTCAG AAGCTATGTC TACACCTGAT GCACCTTATT GGAAGGAAGT AGTCAATACT GAAATAGACT CTATCTTGCA ACATCATACT TACGAGATAG CAGATCTACC CCAAGGCTCT AAACCATTGG GAAGTAAATG GATTTTCATA ATATAACGGA AAACCAATGG TGATATTGAT AGGTACAAGG CTAGGCTTGT GGTGCAAGGA TTTCGACAAA AAGAATGCTT GGATTTTTTT GATACCTATT CTCTTGTAAC GAGAATAACT TCAATCAGGA TGCTCATAGG CATTGCTGCC TTACGAGATC TTGAAATCCA TCAAATGGAT GTAAAAACTG CCTTTCTCCA TGGAGATTTG GAAGAGGAAA TCTACATGAA ACAACCTGAA GGGTTTGTTA TCCTAGGACA AGAACACAAA GTGTGTAAAC TTGTGAAGTC ATTATATGGA CTCAAACAGG CTCCTAAGCA GTGGCATGAG AAGTTTGATA ATGTGATGAT GTCTAATGGC TTTAGCATTA ATCAATGTGA CAAATGCATA TATTTCAAAA TTACTCCAAC AGGGTACATT TTGTTATGTT TATATGCTCA TTTTGGGGAG CAATAAAGAC ATCATAAATC AAATGAAAAG CATGCTCAAA AGATATTTTG ACATGAAAGA CTTGGGTCTA CCAGATGTCA TTTTGGGTAT AAAAATCATC AGAACTGATG AGGGCCTTAT CTTGTCTCAA ACCCACTATC CTGAGAAGAT ACTTGATCGT TTCAAGCATT ACTCAAATGG GACTGAAAAA ACTCCAGTAG ATCCTCAAAT TCACTTGACC AAAAATTCAG GTGAACCTGT GCAACAGGTG GAATATGCAA GAGTAATTGG CAGTTTAATG TACTTGACAA ACAGTACAAG ACCGGATTTA GCGCACTCTG TAAATGTACT TAGTCGCTAC ACAAGTAATC CAGGACATAA GCATTGGAAG GCTATAACTA GAGTTTTGAA CTATCTACGT TATACCAAAG ATCATGGCTT GCACTATGGT AAAGAACCCG CAATTTTAGA AGGTTACAGT GATGCCAATT GGATCGCAGA CTCCAAGAAC TCAAAATCCA CAAGTGGATA CATCTTTACA CTTGGAGGTG CATCAGTGTC TTGGAAATCT TGTAAACAAA CTGTGGCGGC CAAATCAACT ATGGAATCTG AATTCATTGC GTTGGATACA GCTGCAGCGG AAGCCGAATG GCTCCGTAAT TTCTTGGAAG ATATCCCAAT GTGGGGGAAA CATGTGCCTG CAATACGTGT ACACTGTGAT AGCCAATCGT CTATAGGCAG GGCACGAAGT ACCCTATATA ATGGTAAATC TCGTCACATA AGACGACGAC ATAAAACCAT TAGACAACTT ATCTCAACTA GAGTAATCAC GATTGATTAC ATCAGGTCAG CAGACAACCT AGCGGATCCA TTTACAAAAG GTTTGACACG AGATCAAGTT GCGAGATCAT CAAGAGGAAT GGGTTTAAAG CCTATGACTT AAGAGGAGGT TTGATGGTAA CCCCACC 
Length2037
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17433335.. 17464588
Download Sequence
A.thaliana
AGI-codeAT3G29782.1
Descriptiontransposable element gene
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
32.249 Ahg337923
36.8375 Ahg319243 RNI-like superfamily protein
37.229 Ahg493311 Calcium-dependent lipid-binding (CaLB domain) family protein
43.9545 Ahg906745 polyol/monosaccharide transporter 2
63.1664 Ahg909881 NAC domain containing protein 49
70.7814 Ahg899865 flavonol synthase 5
74.1755 Ahg896296 Toll-Interleukin-Resistance (TIR) domain family protein
77.6144 Ahg939618 Protein of Unknown Function (DUF239)
78.5875 Ahg481037 Plant protein of unknown function (DUF639)
93.2792 Ahg491810 Phospholipase A2 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression