Detail



ID : Ahg480432

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480432|fgenesh2_kg.3__3133__AT2G15860.1
Sequence
GCTAACTGAA TTACAGTTTT CGATTCGAAA TTCTTAATCC CATTTTCATT CCTTCGACAA ATCTTCACAC AATCCTAATC TCATTTCTGG TAAATCCGAT TTTGGTGAAA CCCTAATTTG ATCTCCAGAT CGCTATCGAC GATGGAGGAA GACAAGCAAA TGCACGAGGA GAAATCATCC CCGGTTAAGG GAGAAGAGCC TGAGATTGAG AAATTGACAG TGGCAGATAC CGATGCGCCG CCGAAGAGTA CCGGTGGTTG GGGTTGGGGT TTCTCTGGCT TCTCTGTACT TTCCGATCTT CAAAAAGCTG CGGAAGAGAT TTCTCGTAAT GCTGCAGCGG TGGCGGAGAA AGCGGCGAAA AGTATTGCAG ATATGGGAGA AGTGGATGAA GACTCTGAAT CTTCTGCTAA GGAAGAAGAG AAAACTGAAG AAGCTGATAC AGAGCAGGAT AGTGATGATG AGAATGCAAA GTTAAAGAAG TCAGCTCTTG CGAGATTGGA GGGGGCAAGT GAAGAGTCGC TTCTTAGCCA GGGTTTGAAG GTTTTCGATG ATTCAGTTGA GAGTTTCACT TCTGGTGCTT GGCAGGCATT TGGAAATGCG TTAAAAGGGG GCACAAGTTT GGTGCAAAAG CTTGAAAACA GTGTCCAGCA AGGTTCTTCT CCTAGGGAAG CTGGATCTGG TGCACCGTCT CTACTGGAGA CAGGAAAAGC ATTAACTGCT AAAGGAATGC AAGTACTTGA ATTTGTGGGC AAGGAAACCA TGGATTTACT GATTACAGAG ACTGGTCTTG GAGCTGAGCA GAATAGGGTA GACTTTAAGG ATCAAATACC TGAGGAAGTT ACATTTGATC GATGCTTTTA CATTTATGGT GGTCCTGAGC AGCTTGAGGA ATTGGAAGCA TTGGCGAGCC ACTATACTCT GTTGTTCAAC AGGAGAAAGG GGAAATTGTC ACCAGATCAA AAATCGTTGT CTGACGGGAA GCTCAAACAA ATCCAGCAAC TGTTTAGCTT CGCTGATGAA ATGAGTGGAA GTAAAGCAGA GTCTGACAAA GGGAAGAAAA TTGATATCAA AACTGAAGGC AATGATGATG ACATGAAGAA TCTGCATAAC TCGAGTGTCA GCAAAGCTGC TGATATGGCT GCTGGGTTCA CAAATGCTTT AGCGGGACTA AACGTAAACG ATATGATCCA GCGGACCGGT GGCAGGCTTG AATCTCTTCA CTCAGAAGGA GTTCATAGAC TTTCAGAGAT GTGCTGTTTT GCAGTCACTC ATCTGCTTAT TCTCGGTAAG TCCATGATAT CTCATGCCAA CAAAGTTCAG GAAGAAGACA CTGAGGCGTT GAAAATCGAA TGGCCAGAGG ATCCTACGGA GAAAGCTAAG CTGATTAAAG GCAAGGCAGA ATCGATGGCT GGATATGTTG AAGCAGTTTC CAACAGTTTT ATAACAGGTA TATCAGACGT ATCTGAAACA TACTCGGCTG CGATTAAAGG AGTTGCTGCT GCTGATTCCA AAGATGATCT TCTGAAAACA TCAACCATGC AGGAAAAAGC AAGCACCTTC AACGATAGTC TTCGGTCTGA CCAAACCACA GCTATCACAA AGATCCAGGA AGGGCTTCAG TACCTGTCCT ACGTTGTGAT ATCTACCTCA ATGCCCTCTT CCTGATATAA TAAGAGTCAG ATTGGTCTTG TTTGTGGTTT ACATGACTCA GGATTCGATT TAGTTTTCTT TGTAATTGTA GATATATCTC TTTCGCTAGA TGCTCTTATG GTAAGTTTTT CACACTTGTG CTCTGCTTCT CTGTTGTCTG GATCTTGAAA GTTTTATTAA ATCTAGAAAC CAAAGATTGA AAGCAGGGAA GAGATTAGTA ATTTCATCGA ACTTTTGTTA GAAATATATT GTTGCTTCCA AATTTTTTAC TTGGAAGGTG GTTTAG 
Length1936
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19291637.. 19295336
Download Sequence
A.thaliana
AGI-codeAT2G15860.2
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.1067 Ahg470078 SEC7-like guanine nucleotide exchange family protein
18.3303 Ahg493254 LSD1-like 3
32.7261 Ahg924607 transcription factor jumonji (jmjC) domain-containing protein
37.4166 Ahg495211 PLAC8 family protein
40.9268 Ahg490644 methylthioadenosine nucleosidase 1
48.518 Ahg314757 RNA polymerase II transcription mediators
53.619 Ahg487204 Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein
56.1605 Ahg477117 Pentatricopeptide repeat (PPR) superfamily protein
61.563 Ahg481549 plectin-related
62.3298 Ahg480010 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression