Detail



ID : Ahg480448

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480448|fgenesh2_kg.3__3149__AT2G20210.1
Sequence
TGCAGCGGGA AGATTTGGGT TGCGTAGAGC GATTCACACT CTCTTCTCTT TGTTAGGATG ACGAAAGCTC CTTCTCTTGC GTTTCTCTGC ATCCAATCTC TCAAACTTCA GCTCCTTCAA AGCGATAATC CAATTCCAGA TTTATACGAG CTTCCATCGG AGTTACTTGA TGCTGTTATC GCTCACTTGC CTGCTCTTGC GTTGCAGAAT TTTCAGACCA ACATGCCGTT TAATTGCTTG GATAATTATG AATCTGGAGA TGATTGCTTG ATTAATGGCA GAAAACGTTC AAGCAGAAAT GATCCACTTG GTAGCTCTTG GAAGATGTTG TTTAAGCTGC GGTGGCCTGA GTTTGTTGAC CGTGTGGAAT CACCAGCTGA TTGGCAACAG CTTTACTGGG AAAAGCATCT GCAAAATTGT GTTGATGAAG CAGCTGAGGT TGCTCTGCGT CCGACATTTA GTGGTCGGAT TTGTTCTATT AATGTATCAG ATAACATATT GAGATACATT TGCCATGAAG AGCATATGAC TTGTCAAAAA TGTGTCTGCA AGGAACTATC TTTTCATTTC CAAACTTTTG GACCGTATCT TAGGTGTCTG AGGCTTCTGA ATGTGCTATG CGTTACAGAA ACTTCTGAGT TATTGAGGAC AAGTAAATTG CAAAGTTTGG TTCTACGTTG GATCAGATCC GAGAAGCATG TTGAGCCCTT GTGCAAGCTC TTGATCCAGA CCCGAGACAC CTTAATTTCG CTTGAGTTTA TTCACTGCAA GCTTTCTTCG AGTTCCATCA GTGCAATATG CGCTTCTCTT CATGAAAAGG GTATCCACAC TACTGGGATG CAACGTTTCT GTATAAAGAC ATCTAGCATT GAGATAGATC CACTTGCTGC ACCTTCTGCT TTCGTTTCAT TCCTGATGTC GGTGAGGACC TTACATTCCT TACATTTTTG CGATAGCAAC CTTGATAGGC ATATCGCGAG GATGGTTTTC TCTACACTTC TTGATTCTTC TTCAAACCTT TCGTCCCTTG ATCTCTCTGA AAACAATATT TCAGGATGGC TTTCTACGTT TAGCTGCAGA TCTGTTGTTG GTTCTCTGTC ATCCGGAAAG TCTTTACAGT CCCTGTGCAA GCTCAACTTA AGGGGAAATG AACTCGACAG ATACGATGCA GAGAATCTTG CACATGCTCT TCTTCATATG CCCGGCTTGG AATCTCTTGA CCTGAGCGGG AACCCCATTG AAGACAGTGG GATCAGAAGC TTAATATCTT ACTTCACAAA GAATCCGGAT TCTCGTTTAG CCGATTTGGA TTTGGAAAAC TGTGAGCTGT CATGTTGTGG AGTTATCGAG TTTCTTGATA CCTTCTCAAT GCTGGAGAAG CCTATAAAGT TCCTATCTGT TGCAGATAAT GCCCTCGGAA GTGAGGTTGC GGAGGCTATA GTAAACTCTA TCACAGTCTC CATTGAGTCT CTCAACATTT CGGGTATAGG ACTAGGTCCT CTCGGGTTTC TTGCGCTAGG CAGAAAACTT GAAAAAGGGT TGAAGAAGCT CCTGAGTATC AATATAAGCA AAAACCGTGG AGGACTAGAG ACTGCTAGAT TCCTGTCAAA GCTCATACCC TTGGCACCAA AACTCATCTC AATCGACGCA TCCTACAATC TTATGCCACC CGAAGCCTTG CTCATGCTAT GTGAATCCCT GAGAACTGCA AAATGTGATC TCAAACATCT TGACATGACC GGGAATAGCT GCATCAGCCA TGAAGCTAAC CATTCTTCTC TACACCGTGA ATTTCAACAC AACGGAGAAC CCATCTTCGT TTTACCTTCA TCCTCGGTTT CACATGTTCC TTACGATGAT GACCCGTAGA TAATTCCTCT AGACCTGTTT ATCCTTTAGT CTGGTTCTGT TTACTGGTGA ATTCATTGGT TATGTATGTG CATTAGGTTG GCTCAACGTT CACATGAAAT AGCATCCCAA AACATCTAAA AGCGTCGCCC AAAAAAATAG TCAGAGAGCA GTGATTTAAA TC 
Length2032
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19433396.. 19436997
Download Sequence
A.thaliana
AGI-codeAT2G20210.1
DescriptionRNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15 Ahg325092 vitamin E pathway gene 5
22.4944 Ahg487916 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
28.4077 Ahg918814 Heavy metal transport/detoxification superfamily protein
28.8617 Ahg938262 Leucine-rich repeat protein kinase family protein
29.1376 Ahg919779 branched-chain amino acid transaminase 2
33.2866 Ahg916127 Calcineurin-like metallo-phosphoesterase superfamily protein
36.4966 Ahg483824 RNA-binding (RRM/RBD/RNP motifs) family protein
41.0366 Ahg934176
42.8486 Ahg480666
47.1593 Ahg951394
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression