Detail



ID : Ahg480532

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480532|fgenesh2_kg.3__3233__AT2G19390.1
Sequence
AGTCCTAGTT TCATCGCCGA TCAAAAACTA GCAACGAACC AATGCGCCTT CGATCCCGTC ATCTCATGGC AACGTTGCTT GATTTCGATT TCGAGCTTTT TTTTTTTTTC ACGAACTCGC TGAAACGATC TAATCCTCAA AAGCTTTGAT TTTTGGTATT GGGTTTTGTT GTATCTGCGG AAATTTTTGT TTCCTTTGCC GCGGTTTGTG ATTCAGAGGG TTTAATTATA GCTGTCTAAT TGTGTCTGTC CGGTGCTCAA CGAACGAACT AAGTGGAAGT GAATATTGGA GGAATATTTA TCACCTGGAT TTTCTGATAG CAGGTGCATC TTAAATCAAT TATTTGAGAC TGAGAAATCA GCATTTATGT GCTACAGCTT GTCATGCTCC AGTGTGTGTT TAGTGTTTAT TATAAAACAT AAGACTTTCG TGAGCTGAGG GAATGTCAGC ACCTGGGAAG TTTGATTATT CTTCTGGTGG GCTAGATAGG CCTCTCTACA GATCTAACTT TGCCGCACAG ATGGAAAGAT CGAGTAGCTT TCGCGAGTCC ATCGAACATT CTGTCCCATC TCATCCAATC ATGTTGAGGA CCACTTCACC AATAGCACAA ACCGATGTAA CAAATTTCTT TCAGTGTTTG CGTTTTGATC CTAAGGTGGT TGCCGCGGAT CACAAGTCTA TTCGTCAAGG TGACTTTAAG CGACATGTTA GTATTGCTCT TGGAATACAA GGAGATGAGT CTCCTAGTGG ATCTTTGAAA GGAAAGTTTA TTCCATCGCC TATACCAGAA GAGATCAAAA GATTTAAGGC TGGTCTGCGC GAAAACAATG TGAAGGCCAG GGAGCGCGTA AAAATTTTCA ACGAAGCTTC TTCTGTATTT AACAAGTTTT TCCCAAGTGT ACCTACAAAG AAAAGGTCTC GACCTGAAGG GTTTTCTGGT GATCGGTTGG TATCAGGACC AGGCCTTGGT AAAATGGGAA TTCAGAGTCA GACCCTGGCT GGTGGTTTTG AGCTTGACCA GCAAAAGTTT GATGAACGAC CTAAAAGTGG TGTTCCAAAT AAGAGAACAC GTACTTCTAT GATGGATGTT CGAAGCAATT CTATTGTTCG ACAGTCGGCG GCTGTAGACA GAGATAAAGA AATAATGCGG GTAGCAAATC ATAATGCAGT TCAGGGTGAA GATCGAACTT CAATTGGTAT TGATGGTTGG GAAACGTCAA AAATGAAGAA AAAACGCTCC TCTATTAATG CGGACTGCCA TCCTAACTTG GCTTCAAATA AAGTGGTTGA TGGTTACCGA GACTTGAAGC AGGGCATACA ACAGAAATCA ACAGGCGACT CCCGGTCGAG ATTGAATGGT GACTCAAACA TGTTAAGGCA ATCGACTAGT AATGGAGCTA CTGGGTATGG AAGATCTGAT AACATCTCCC ACCAGACGAG CCTGGCTGGG CATTCTCCAC TGCCGAGGGT TGATTCTGAT CATAATTCTT TGTACAATGA GAAGAGAGAA CGCTCGATTG GCTCAGATAA GGAAAGGGTG AATCTCAGGG GAGTCAACAA GTCAAATATT CATGATGAAT TCAATTCTTC AAGTCTGGTT TCAAACACAA AAACAAATGC TTCAGTTCGT GGACCTAGAT CAGGATCGGG GCTACCACCA AAACTGTCTC CAGGACTCCA TAACACTCCG TCCCCAATTG AATGGGATAT CTCTGGCTGT ACGAATAAGC CTCCAACATT GTCAGGAGTT ACACATCGCA AGCGTATGAC ATCAAATCGG TCTTCATCAC CACCTGTCAC TCAGTGGGCC AGTCAAAGAC CACAAAAGAT ATCCCGGATA GCAAGGAGGA CAACTTTAGT GCCCATTGTT TCTAGTAACG ACGAAGTTCC CTACTCTGAT AATATATCAG ATGCTGGTTG TAGTGAAACT GGGTTTGGAT TTCATAAACG TTCGCCAGCT GCTTCTCCTC AATTGAAGCT AAAAGGTGAA AGCAGCTTCT CCACTGCAGC CTTATCAGAA AGTGAAGAAT CTGGCCCCCC TGAGATCAAA TCTAAAGACA AGGGTAAACA GTCTGATGAG GTTGATGGGA AAGCTGCACA AAATATTCCT AGAGTGTCCA TCCCTGCTTT ACAATCAAGA AAAAGTAACA AGCCTGCAGC TGGTGAAGAG ATTGGGGATG GTGTGAGAAG GCAAGGAAGG ACAGGCCGTG GCTTTTCTTC CACGAGGTCT CTTAACCCAA ATGGAGTAGA TAAACTTAAG AATGTTGGAA CAGCTAAACA TCTTCGCAGT GCAAGACCTA TTTTTGACAA GAGTGAAAGT AAGGTGGGTC GTCCACCCAC TAGGAAACTA TCTGATCGTA AGGCCTACAA ACGTCAGAGA GCTACGGCAA CAAATGCTCC AACACTAGAT TTTCATGTTG GTTCAAATGA TGGCCGTGAG GAGCTACTGG CAGCTGTCAA CTCAGCTGTA AATTTTGGTC AGAATTTTCC CAACTCTTTC TGGAAGCAAA TGGAGCGCTA CTTTTGCTAT ATATCTGATG ATCATATCAA TTTCATGAAA CAACAGGGAG AACTCTCCTC CATGGGTCCT ACGCCCATTT TGACATCCTC TGAGTTTGAT AGCCGTGTGT TTCCCGAGGA ACTTGCAACT AGCAGGGCGG ATTCCAAGGC TTCTCCACTG TACCAGAGAT TGCTATCAGC TTTGATTTCT GAGGACTCGA TGGGTGTAAA TGAAGATTTA CAAGTTGATG GATTTGGGGC TATGCATGAC GATGACTCAG AATTCAGTGT TCTGAATAAT ATGGAGTTCA ATGGGTTTAG AAACAATGAA AGGCTGGAAC TTGATGAATC AGAAGATGAT GGGTCTGCGA TTTTGTTCAA GGGTGTTAAT AAGTCAGCCC ACCACTGCAA TGGCAAATTT CCAGATACTT CACCCATTGA CTTCTTGGAC ATTCAATATG ATAAATTGGG GATAGATGAA AAGATTTATC TGGAAGTCCA GTCTCTTGGA ATATCCTTAG AACCAATGCC TAGTATCTCA AACGTGGAGG ATGAAGGAAT TGCGGACGAA ATTAAAAAGT TGGAGGAGGC TATCTGCAAC GAGGGTTCCA AGAAGAAAGA GATTGTGGAT AGGCTACTAA AGCCTGCCAT AGAGATGAAA GAATTTCAGG AGAAGGAGCT TGATCAACTT GGTTATGAAA AGCTCATCGA GATGGCATAT GAAAAGAGCA AGGCAAGTCG GCGTCATCAC AACGCTGGTG GAAAGAATTC CAATAACAAG ATTTCAAAGC AGGCTGCATT GGCTTTTGTT AGAGGGACGC TTGAACGATG CCATCAATTC GAAAAGACGG GAAGAAGCTG CTTCAGTGAG CCTGAATTTA AGGATATGTT CATTGCCGGG TTGGCAACAG CCGAAGATAC TCTCATGGAC AAGGAGTATA ATCCGTCAAC TTCAACACCC ATGGGCTCAC AGCCAAGCTC TTCGTTGGCA TGCATTGGGC AGAACTCGGA GAACTATGCC AGTTCTTCTG ATGTTCTACC ATCTGAAAAT GCTTTACTAG AACAAACGAT GGGGAAAGAA GATACAGCAT GGTCCAATAG GGTCAAGAAG AGAGAGTTGC TGCTTGATGA TGTTGGTATT GGGGCACAAC TCTCAAGTAA TACAAAGGGG AAGAGAAGTG ACAGGGACAG AGATGGGAAA GGGCAGGCTT CATCTAGAGG CGGAACCAAT AAGATCGGCC GGCCTTCCCT GTCCAATGCT AAGGGTGAAA GAAAAACGAA AGCAAAACCG AAGCAGAAAA CAACTCAGAT ATCTCCATCT GTTAGGGTCC CGGAGCAACC CAAACCATTG TTACCAAAAC CGAATGAAGC AAACAGCGAG TATAATAACT TGGAAGCACT GGAGGAGACT GAGCCAATTC TCGATTTATC TCAGTTACAA ATACCAGATG GCTTAGGAGA TTTTGATACG CAACCAGGTG ATATTAGTTC ATGGTTTAAC ATGGACGACG AAGAAGATTT CGATATCACG GAGCTTGGGA TACCAATGGA TGATCTCTCA GGGCTGAACA TAAAGTTATG AGGTCACCAC TCCCTCTCAC TCTATCTATA GTTGTATAGT CTTGTTGGTT ATACTAGTTG ACAAAAAGAG CGTAAGGTAA AAGAAAATTT TTGCTTCCTT GGGCGAATAA CCAATACAGG AAATGGGTTA TTCGGATGTT AGCTCCAGAA AATTAGGTCA TTTAGATTCT TTTCTTCATC ATCTTCTCCT TCTTCTTCTT AGGCTTCTTT TCCGTCTTCT TATAACTCCG ATTTCTCGGG TGAATCTCTT TTTACTTTGG TGATGGATGC TGGATTTGGA TCCGGTGGGT AAACTAGGTT GATAGTTAAC TTCCGGCTCT AACAAGCTGT TGTGGC 
Length4416
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19951340.. 19959455
Download Sequence
A.thaliana
AGI-codeAT2G19390.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg482300 C-terminal domain phosphatase-like 3
4 Ahg489171 Tudor/PWWP/MBT domain-containing protein
7.34847 Ahg489001 Protein kinase superfamily protein
12.9615 Ahg476021 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
14.8661 Ahg931346
15.0997 Ahg481072 RNA-binding (RRM/RBD/RNP motifs) family protein
22.1811 Ahg929447 ENTH/VHS family protein
23.2164 Ahg333080 RNA recognition motif (RRM)-containing protein
26.6646 Ahg478682 multidrug resistance-associated protein 3
27.0555 Ahg336003 nudix hydrolase homolog 15
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression