| Annotation |
|---|
| Description | jgi|Araly1|481072|fgenesh2_kg.4__132__AT2G22090.1 |
| Sequence |
AAATCAAAAA TCAAAATCCC TAAAAGCTTC TTATCCTCAA CTACAATGGC GAAAACCCTA GACAAATCTA AGAAACGCAA ACTCGTGAAA TCCAAATCCA AGAAACTCGA GAAGAAACAG AAGATTAAAA AACAACCTGA ATCATCGACG CCATATTCAA GTTCAAGCTC AAGCTCTGAT TCTAGCGATT CTGAATCAGA CAACGAATTC GATCCAGAAG AGCTACGTGA GCTTCTACGA CCTTATTCCA AGGACCAGCT CGTCGACCTC GTTTGTTCCG CTGCGCAAAT CGGATCCTCG ATCTATTCCG CCGTCGTAGA AGCTGCAGAT CGTGATGTTA TCCATAGGAA AATCTTCGTT TATGGTCTTC CATGGGAGAC GACTCGAGAG ACTCTTGTTG ATGTCTTTGA AGGTTATGGA GAGATTGAAG AGTGTACCGT TGTTATAGAT AAGGCTACTG GTAAGGCTAA AGGATTCGGA TTTGTTATGT TCAAGACGAG GAAAGGAGCT AAAGAAGCGC TTAAGGAACC GAAGAAGAGG ATTCTTAACA GAACTGCGAC TTGCCAGCTT GCTTCTATGG GGCCTGCGGC GTCGGGAAAG GGGCATGATC AGGCTGGTCC GGTGAAGATT AGTATGGGTT CGATGGTTAA TCAGGGCCAG TCTCAGCAAC AGCAGGCGCA AGGGCAACAT ATGTTTAACG GTGGTGGAAT GGCTGCATCG CCGTTTATGT TAGGGAATCA ATACCATCCG GTTTATGGAG CCGGAATGTT GGCGAATCCA GCTTTAGCAG CAGCAGCTGG TGGAGGTTAC ATGTATCCGA TGTTGGCGGG CGCTCTAGCT CATGGTGGGA TGGGTTCTGA TTTGGTACAG TCTAGTCAAA TGGGTGGGAT TGGTGACCCA AGCGTTGGTG CTGCTGGTCT GTCAGTTCTT GGTTCTTACT TTAGAGGTCA GAGTATGCCT AGTGCTTATC CTGATTCGGA TGCTGGTGGA AAAAGAGGGA CGGGTAAAGA TTCGGATGCT GGTGGCTCCT CCTTTCATGG CTACTCAAAC TATTCATGAT GATGTGAGCT GAGCATGAGA ATGATAAACA TGCAGTTCTG GGATTTCTTT TAACATTTCT ATCAAGTCAG TACGTTTTAG CTTTTTCTTG TATTGTTTTT TTCTTCCTTT TGTTTTTCTG TTTGATTTCG CTCTTGTCCG ATACCATAGG ATGAACAGTC TATGAACAGT CTATATCATT GTGATTATTC GTTAAAGACC TATGTGCAAT CT |
| Length | 1272 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 616218.. 618249 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G22090.2 |
| Description | RNA-binding (RRM/RBD/RNP motifs) family protein |
| TAIR curator summary | encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. As with UBP1, transient overexpression of UBA1a in protoplasts increases the steady-state levels of reporter mRNAs in a promoter-dependent manner. Along with UBP1 and UBA2a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus. |
| Alias | [UBA1A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10 |
Ahg935676 | Protein phosphatase 2C family protein |
| 15.0997 |
Ahg480532 | |
| 15.906 |
Ahg909961 | |
| 18 |
Ahg475482 | Arabidopsis thaliana protein of unknown function (DUF794) |
| 20.8327 |
Ahg475057 | Chaperone DnaJ-domain superfamily protein |
| 21.6564 |
Ahg922436 | RING/FYVE/PHD zinc finger superfamily protein |
| 29.3258 |
Ahg941041 | PHD finger family protein |
| 49.6991 |
Ahg483834 | CDPK-related kinase 3 |
| 53 |
Ahg909718 | structural molecules |
| 53.066 |
Ahg481281 | LJRHL1-like 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|