| Annotation |
|---|
| Description | jgi|Araly1|480687|fgenesh2_kg.3__3388__AT2G17870.1 |
| Sequence |
ATGGAAGATC AATCGGCGGC GAGATTTATC GGAAAAGTTA ATTGGTTTGG CGATGGTAAA GGCTACGGTT TCATTACTCC CGATGATGGA GGCGAAGAGC TTTTTGTTCA TCAATCTTCA ATCGTCTCCG ATGGTTACCG TAGCTTAACT GTTGGTGAAT CGGTTGAATA CTCAATCACG CTTGGAAGCG ACGGGAAGAC TAAGGCCGTT AATGTTACTG CTCCTGGCGG CGGTTCTCTT AATAAGAAGG AAAATAGCTC CCGTGTAAAC GGTGGTAGTT GTTTTAATTG CGGTGAGGTT GGTCATATGG CTAAGGATTG TGACGGTGGT GGTGGTGGGA AAAGCTTTGG AGGTGGTGGT GGTCGTAGAT CTGGGGGTGA AGGTACCTGT TACGTGTGTG GTGATGTGGG ACACTTCGCT AGGGATTGTA GGCAAAGCGG TGGTGGAAAC AGTGGTGGAG GAGGAGGTGG TGGTCCGTGT TATAGTTGCG GAGAGGTTGG TCATTTGGCA AAGGATTGTC GTGGTGGTTC TGGTGGGAAT AGATACGGAG GTGGTGGTCG TGGATCTGGC AGTGATGGAT GCTACCTTTG TGGTGGTGTT GGACATTTCG CTAGGGATTG TAGGCAAAAT GGCAGTGGAA ACGTTGGAGG TGGTGGCGGC GGTGGAAACA CTTGTTATAC CTGTGGCGGA GTTGGCCACA TTGCAAGAGT TTGCACCAGC AAGAGACCTG CTGGTGGTGC GTGTTACGAA TGTGGAGAAA CTGGCCATTT GGCTCGTGAC TGTGATCGGA GAGGAAGTGG AAGCAGCGGT GGTGGAGGTG GAGGTGGCGG TGGTAGTGGC AGGTGCTTCA ACTGCGGCAA GGAAGGTCAC TTTGCTAGGG AATGTTCTTC GGTTACTTAA CAAAAAGATG CAAAGAAGAG TAATGTTCAT ATACTCTATT AAATCTACCT AAGCTCCGTT TTGGTGACTA TAATGTGATT GCTAAAGTCG TTTAGGATGT TTACGAATGG TTGTTTTGGG AGATTTTGAT CTCTATATTA CTCTTTTGAC TGGTTTTCGC AAACCTGTTC ACTGCTTTTG TTGATGTTGA TGCCATAAGT TTGAGACTTG AATGATATGT GTGCAGTTTC TTGTTTTTCC TTACAATGAG TGTGCTTGTA TGACTTGAAA ATTC |
| Length | 1174 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 21040914.. 21042100 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G17870.1 |
| Description | cold shock domain protein 3 |
| TAIR curator summary | Encodes COLD SHOCK DOMAIN PROTEIN 3 (CSP3), involved in the acquisition of freezing tolerance. |
| Alias | [ATCSP3][CSP3][ARABIDOPSIS COLD SHOCK DOMAIN PROTEIN 3][cold shock domain protein 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.83095 |
Ahg496435 | RING/U-box superfamily protein with ARM repeat domain |
| 34.6987 |
Ahg487209 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain |
| 40.7676 |
Ahg897300 | Protein of unknown function (DUF2921) |
| 41.5331 |
Ahg910790 | Transducin/WD40 repeat-like superfamily protein |
| 44.3283 |
Ahg895852 | |
| 44.8888 |
Ahg922436 | RING/FYVE/PHD zinc finger superfamily protein |
| 50.1996 |
Ahg947286 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
| 52.3641 |
Ahg897581 | cytidine/deoxycytidylate deaminase family protein |
| 55.8211 |
Ahg495966 | TBP-associated factor 15B |
| 59.2621 |
Ahg497341 | Protein of unknown function (DUF295) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|