Detail



ID : Ahg481188

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481188|fgenesh2_kg.4__248__AT2G23170.1
Sequence
ACAAAGTCTA ATATTATCCC TTACAACAAA CCATTTTAAT CATGACCGTT GATCTACCTC TGCGATCTCC GATGAACTAC TCACCGTCCG ATAAGGACGT GAAGGCTCTG AGGTTCATTG AGGAGATGAT ACGTAACGTC GATTTCGTTC AGAATAAAGT CATTAGAGAG ATACTTCGTC GCAACTCGGA GACTGAGTAC CTGAAACGGT TTGGTCTCAA GGGATTCACT GACCGGAAAG CATTTAAGAC CAAAGTTCCG GTGGTTACCT ACGATGATCT TAAACCGGAG ATTCAACGTA TAGCCAATGG TGACCGGTCT ATGATCTTGT CATCACACCC CATCACCGAG TTCCTCACAA GCTCTGGGAC ATCAGCTGGT GAAAGGAAGT TGATGCCCAC CATTGAAGAA GACATGGACC GACGTCAGCT TTTATACAGT CTTCTCATGC CTGTGATGAA TCTCTACGTG CCCGGATTAG ACAAAGGCAA GGCTCTATAT TTTTTGTTCG TGAAGACGGA ATCGAAGACA CCCGGTGGAT TACCGGCACG TCCGGTTCTC ACGAGTTATT ACAAAAGCGA ACAATTCAAG AGACGTCCTT ACGATCCGTA CAACGTGTAC ACGAGCCCTA ACGAAGCCAT TCTTTGTCCC GACTCGTCCC AAAGCATGTA CACTCAGATG CTTTGTGGTC TCCTTATGCG TCACGAAGTC CTCCGTCTCG GTGCCGTCTT CGCTTCCGGT CTCCTCCGAG CCATAGGGTT CCTTCAAACC AATTGGAAAG AACTCGCCAA CGATATCTCC ACCGGTACCC TAAGTTCAAG AATCTCTGAT CCGGCTATTA AAGAGAGCAT GTCCAAGATC TTGACCAAAC CGGACCAAGA ACTGGCTGAT TTCATAACTT CGGTATGTGG TCAAGACAAT AATTGGGAAG GTATTATTAC TAAGATTTGG CCTAACACTA AGTACCTTGA CGTCATCGTT ACTGGAGCCA TGGCTCAGTA TATCCCGATG CTTGAGTACT ATAGCGGCGG GTTACCGATG GCTTGCACGA TGTATGCATC CTCCGAGAGT TACTTTGGGA TCAACTTGAA ACCAATGTGT AAACCTTCTG AGGTTTCTTA CACCATTATG CCAAACATGG CCTACTTCGA GTTTCTCCCT CATGAAGTCC CAACCGGAAA ATCCGAACTT GTAGAGCTAG CTGATGTCGA GGTTGGGAAA GAGTACGAGC TTGTGATCAC AACCTATGCA GGGCTTAACC GTTATAGAGT TGGTGATATT CTTCAAGTGA CTGGATTCTA CAATTCCGCT CCACAGTTCA AGTTTGTGCG GAGGAAAAAC GTTTTGCTTA GCATTGAGTC GGATAAAACC GATGAAGCTG AGCTCCAAAA GGCGGTTGAG AATGCATCGG TGTTACTTGG AGAGCAAGGA AATCGCGTGA TCGAGTACAC AAGCTACGCA GAGACAAAGA CTATACCTGG CCATTATGTC ATCTACTGGG AGTTTCTGGT GAAGGATCAA ACCAATCCAC CAAATGACGA GGTCATGGCT CGGTGCTGCT TGGAAATGGA GGAGTCGTTG AACTCTGTGT ATAGACAAAG TCGGGTTGCG GATAAGTCGA TAGGGCCACT CGAGATACGT GTGGTGAAGA ATGGAACGTT CGAGGAGCTC ATGGACTATG CCATCTCGAG AGGAGCCTCG ATCAACCAGT ACAAGGTGCC GCGGTGTGTG AGTTTCACGC CAATAGTGGA GCTGCTTGAC TCAAGGGTTG TATCTACACA CTTCAGTCCA GCTTTGCCAC ATTGGTCACC AGAACGCCGT TGTTGAGAAG ATTTTGTTTT GGTTTAGGGT TTGTGAGTCG TACAATAAGT TCGGTGTACG GATGTTTACC CGATCAATGT T 
Length1901
Protein Sequence
Protein Residue
Map Locationscaffold_4: 1542276.. 1544669
Download Sequence
A.thaliana
AGI-codeAT2G23170.1
DescriptionAuxin-responsive GH3 family protein
TAIR curator summaryencodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.
Alias[GH3.3]
Gene coexpression
MR
MR Locus Description
38.0395 Ahg910390 Mitochondrial substrate carrier family protein
38.923 Ahg947711
62.7375 Ahg950287 gibberellic acid methyltransferase 2
66.1438 Ahg340538 LOB domain-containing protein 20
69.7495 Ahg473604 FAD-binding Berberine family protein
70.8943 Ahg890578 HSP20-like chaperone
75.6571 Ahg930374
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression