Detail



ID : Ahg481693

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481693|fgenesh2_kg.4__753__AT2G28160.1
Sequence
CACAAATGGA AGGAAGAGTC AACGCTTTGT CAACCATAAA CGATCTAGAA CTTCACGATT TCTTGGTCGA TCCAAACTTC GATCAGTTCA TAAATCTCAT ACGAGGTGAT CATCAAGCCA TCGACGAAAA CCCAGTTCTT GATTTCGATC TTGGTCCATT ACAAAACAGC CCATGTTTCA TAGACGAGAA CCAGTTCATC CCAACACCTG TCGATGACCT GTTCGACGAA CTGCCTGACT TAGACTCCAA TGTCGCTGAA TCTTTCCGTA GCTTTGATGG TGAGAGTGTT AGAGCCAACG GCGAAGAAGA AGAAGAAGAT TACAACGACG GTGATGATTC CTCTGCCACT ACGACGAATA ATGATGGAAG CCGTAAGACT AAGACTGATC GGTCTAGGAC TTTGATCTCT GAGAGAAGAA GGAGAGGTCG TATGAAGGAT AAGCTTTATG CATTGAGATC TCTTGTTCCT AACATTACTA AGATGGATAA AGCATCTATC GTTGGAGATG CGGTGTCGTA TGTTCAAGAA CTTCAGTCAC AAGCCAAGAA ACTCAAATCC GATATCGCGG GACTTGAAGC TTCTTTAAAC TTTACTGGTG GGTACCAAGA ACCTGCTCCG GATGCTCAAA AGACTCAACC TTTTCGCGGT ATCAATCCTC CGGTTTCCAA GAAAATCGTT CAGATGGATG TTATTCAAGT GGAGGAGAAA GGGTTTTATG TGAGATTGGT GTGTAATAAA GGAGAAGGTG TTGCTCCATC TCTTTACAAG TCTTTGGAGT CTCTTACAAG TTTCCAAGTG CAAAACTCAA ACCTAAGCTC TCCTTCTCCT GACAGATACC TCTTAACATA TACGTTAGAT GGGACATGCT TTGAACAGAG CTTAAACTTG CCTAACCTGA AGCTGTGGAT CACTGGATCA CTTCTAAACC AAGGTTTTGA ATTCATCAAG CCATTCACTT GATTCCGTAA CGCTTGCTCT AACGTGAGTA AAATCCGGTT CTGCATCTCA TTGATTGTGT ACCTTTCTTG CATGTTTCAT AACTTTCAGG GATCTAATTT TAATTCTAGT GATGATGTAA TCGAGATTGT TGATTCTCTC TTGAATAAAC ACCGTCTTAT AGAGTAATTT AGCGACAAAT TGTATGATTA AATGAAGTAA T 
Length1161
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11459284.. 11460671
Download Sequence
A.thaliana
AGI-codeAT2G28160.1
DescriptionFER-like regulator of iron uptake
TAIR curator summaryEncodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.
Alias[ATBHLH029][ATBHLH29][ATFIT1][BHLH029][FIT1][FRU][BASIC HELIX-LOOP-HELIX PROTEIN 29][ARABIDOPSIS FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1][FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1][FER-like regulator of iron uptake]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg472976 Syntaxin/t-SNARE family protein
14 Ahg489924
35.9166 Ahg492918
55.0727 Ahg907740
57.2014 Ahg489984 serine racemase
60.4483 Ahg494898 FAD-dependent oxidoreductase family protein
62.45 Ahg940959 Tetratricopeptide repeat (TPR)-like superfamily protein
84.8233 Ahg350155 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
94.8209 Ahg912350
95.9166 Ahg907160 Calcium-binding EF-hand family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression