Detail



ID : Ahg940959

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940959|scaffold_601503.1
Sequence
CTCCACTCCC ACTGCTGATG ATAATGATAA GGATTTGGAA TAACTATAAG GGAAAATACA GATTCTTTCT CTCAAATTGC CGCTCTTTCT CGTCAATCAA ACGACCCCAA GTCCCAGAAA GCGAAGAGAC TAGCCTCTCG ATTTCAAAAC GAATCTTTCA CCCAGATTTA GCTCTCAACA AGACTCGGGT TTACGTCTCT CTCTTCCACA CTCTCTTTCG GCTCTATTTA AGCTGTGGGA GACTCTACGG AGCAGCAAGG ACGCTCTCTG CGATGTGCAC TTTCGGGGTT GTTCCGGATT TGTGTCTATG GAACAGTCTG ATTCATCAAT TCAATGTCAA TGGTTTGGTA CACGATCAGG TATCGTTGGT TTATAGCAAG ATGATAGCTT GTGGAGTTTC TCCCGATGTT TTTGCTCTCA ATGTGTTGAT TCATTCTTTG TGCAAAGTGG GTCAATTGAG TTTTGCGATT AGTTTACTTA GAAATAGAGT AATCAGCGTC GATACTGTTA CTTATAACAC TGTGATTTCG GGTTTATGTG AACATGGTTT AGCTGATGAG GCTTATCAGT TTCTCTCTGA GATGGTGAAG ATAGGTATAT TGCCTGATAC GGTTAGCTAC AATACTCTGA TTGATGGGTT TTGTAAAGTT GGAAACTTTG CTAGAGCTAA GGCTTTAGTT GACGAAATCT CGGAACTAAA CCTTATCACT CATACTATAC TCATAAGCTC CTACTACAAC CTCCATGCTA TTGAAGAAGC ATACAGGGAT ATGGTTATGA GTGGGTTTGA TCCGGATGTT GTTACTTTTA GTTCGATTAT TAACCGATTG TGCAAAGATG GAAAAGTGAT GGAAGGGGGA TTGTTACTGA GGGAAATGGA AGAGATGGAT GTATATCCGA ACCATGTTAC TTATACTACT CTTGTTGATT CGTTATTTAA AGCAAAAGAT TACCGCCATG CTTTGGCTCT TTACAGTCAG ATGGTTGTGC GTGGCATACC TGTGGATTTA GTTGTATATA CTGTTTTGAT GGATGGTCTG TTTAAGGCTG GGGACCTTAG GGAGGCTGGG AAAACGTTTA AGATGCTTTT GGAAGATAAC CAAGTTCCAA ATGTGGTTAC ATATACGGCT TTGGTAGATG GGTTGTGCAA AGCGAGGGAT TTAAGCAGTG CAGAATTTAT CATTACGCAG ATGTTGGAGA AAAGTGTTTT TCCGAATGTT GTAACCTACT CTAGTATGAT AAACGGCTAT GTGAAGAAAG GGATGCTCGA AGAAGCTGTT AGTCTTATGA GAAAAATGGA GGACCAAAAT GTTGTGCCGA ATGGTTTTAC TTATGGTACA GTAATTGATG GCTTGTTTAA GGCAGGGAAA CAAGAAGTGG CTTCTGAAAT GAGTAAGGAG ATGAGGTTGA TTGGGGTGGA GGAAAACAAC TACATACTTG ATGCTCTGGT GAACCACTTG AAGAGAATTG GTAGGATTAA GGAAGTTAAA GGATTAGTCA AAGACATGGT ATCTAAAGGA GTGACGCTGG ATCATATTAA CTACACTTCT TTAATTGATG TGTTCTTCAA AGGAGGAGAC GAAGAAGCTG CTCTTGCTTG GGCTGAAGAA ATGCAAGAGA AAGAGATGCC CTGGGATGTT GTTTCATATA ATGTCTTAAT TAGTGGGCTG TTAAAGTTTG GCAAAGTCGG AGCAGACTGG GCCTACAGAG GAATGAGAGA GAAGGGTATA GAACCAGATA TCGCTACATT TAACATAATG ATGAATTCAC AACGAAAACA AGGGGATTTC GAAGGTATCC TTAAGCTTTG GGATAAGATG AAGAGTTGTG GAATCAAACC GAGTCTGATG ATTTGCAATA TTGTGGTTGG AATGCTATGC GAAAAGGGTA AAATGAAGGA AGCTATTGAC ATATTGGATC AAATGATGTT TATGGAGATC CATCCTAACT TAATGACCTA CCGAATTTTT CTCGACACGT CTTCAAAGCA TAAAAGAGCT GATGCTATAT TCAAAACACA TGAGACACTA TTGAGTTATG GGATTAAACT CAGTAGGCAA GTTTATAACA CTCTTATTGC AACTCTGTGC AAACTAGGTA TGACGAGAAA GGCAGCTATG GTTATGGAGG ATATGGAAGC GAGAGGCTTT GTTCCTGATA CTGTGACGTT CAATGCCCTT ATGCACGGGT ACTTCGTGGG CAGTCATGTA GGAAAAGCTC TTTCGACATA TTCCATGATG ATGGAAGCAG GAATATCTCC AAATGTTGCA ACCTATAATA CTATAATAAG AGGTCTTTCT GATGCGGGGC TAATAAAAGA AGTGGAAAAA TGGCTGAGTG AGATGAAGAA TAGAGGTATG CGTCCTGACG ATTTTACATA CAATGCTTTA ATTTCTGGTC AAGCGAAGAT AGGGAATAAG AAAGAAAGTA TGACGATATA TTGTGAGATG ATTGCGGATG GGTTGGTACC GAAAACCAGC ACTTATAATG TGCTTATCAG TGAATTTGCT AAAGTTGGGA AGATGCTTCA GGCGAGAGAG CTAATGAAGG AGATGGGTAA GAGAAGAGTG AGCCCCAATA CTTCGACTTA TTGTACTATG ATATCTGGTC TGTGCAAACT TTGCACTCAT CCGGAAGTTG AGTGGAATAA AAAAGCAATG TACTTGGCAG AGGCAAAAGG GTTGCTAAAA GAGATGATTG AAGAGAAGGG ATATATTCCG TATAATCAAA CTATTTACTG GATAAGTGCT GCCTTTTCTA AACCTGGAAT GAAGGTTGAT GCTGAAAGAT TCTTAAAGGA GTGTTACAAG AAAAAGAATG CTCGTTCCTC AAATTCGTGA ATCTGGTAAT TCTGTTTCAT 
Length2860
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5760290.. 5763149
Download Sequence
A.thaliana
AGI-codeAT5G14770.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.0333 Ahg910344 NOL1/NOP2/sun family protein
23.7697 Ahg479746 putative mitochondrial RNA helicase 2
33.8821 Ahg485258 RNA polymerase III subunit RPC82 family protein
41.3763 Ahg483169 WW domain-containing protein
42.4264 Ahg481110 Cyclin D2;1
54.8635 Ahg470349 Prefoldin chaperone subunit family protein
62.45 Ahg481693 FER-like regulator of iron uptake
69.9714 Ahg353700 DNA topoisomerase, type IA, core
75.9473 Ahg940804 Auxin-responsive GH3 family protein
82.3104 Ahg892406 DEA(D/H)-box RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression