Detail



ID : Ahg481823

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481823|fgenesh2_kg.4__883__AT2G29050.1
Sequence
AGAGGAAAGA CGATTGATTC ATCTACAACA ATGTCATAAA AAGTTTGATC CTTTCTCTTT AGATTTGGCT TCGAAAATGG CTCGCGATCG GCGGGAAGGT CTGGAGATTA AGGTGGTGAA TCCACCGGCG GCGACAAACA ATGTGTCTGT AGAAACGTCT CCGGCGACGG CGACGAGGAG ACGGAGACAA CAACGAGCTT CGTTCGCTGA GTTTAGACCG TTTAAGCTTT GGTTTCCATG GCTTGTTCCA GCTATCGTGG TGGCTAACAT TGCCCTTTTC GCCATTTCGA TGTTTATTAA CAATTGTCCT AAGAACTCGG CTTATTGCTC AGCTAGGTTT CTTGGGAGAT TTGCTTTTCA GCCTATGAAA GAGAATCCTC TTCTGGGTCC TTCTTCTTTG ACATTGGAGA AGATGGGGGC TTTAGATGTA TCAATGGTGG TTCATAAGCA TGAGGTGTGG CGATTGTTCA CGTGTATATG GCTACATGCT GGAGTTTTTC ATGTTCTTGC CAACATGTTG AGTCTTATCT TCATTGGCAT TCGACTCGAG CAAGAATTTG GATTTGTACG CATTGGATTG CTTTATATGA TATCTGGATT TGGTGGAAGT TTGTTATCTT CTCTCTTTAA CCGGGCTGGT ATATCTGTTG GTGCCTCTGG AGCATTATTT GGCTTGCTTG GTGCTATGCT TTCAGAGCTT CTCACTAATT GGACTATTTA CGCAAATAAG TTTGCAGCTC TTTTGACACT CATCTTCATC ATAGCCATTA ATTTAGCAGT AGGTATTCTT CCACATGTAG ACAACTTTGC CCATCTTGGA GGATTCACAT CCGGGTTTCT TCTAGGCTTT GTTTTCTTGA TCCGTCCTCA GTATGGATAC TTCAACCAGA GGAATAATCC TCGCGGTTAT GCTGCACCGT CTGCTAAATC CAAACACAAG CCATACCAAT ACGTTCTCTG GATCACCTCT TTATTGCTTT TAATAGCTGG ATATACCGTT GGACTTGTAG TGCTTCTTCG AGGGACGGAT CTGAACAAGC ACTGTTCATG GTGCCATTAT CTCAGCTGTA TTCCTACGTC GCTATGGAGC TGTAAATCTC AAAATGTCTA CTGTGAGTCG AGCCAAATTG GACAGCAGAT GAACTTGACA TGTATCGCGA ATGGGAAAAC AGAGATGTAC AAGCTTTCTA ACGATATCCC GTCTCGGGTT CAGCAGTTGT GTTCCCAATT GTGCCGCTGA TACCACTAAA CGTCTAATTT TTATACTCTG TAGAAAGTTA GGAATGTAAG ATTGTTCATT TAACATGATC ATGCACTTGT GGATTCTTCT TTCTGATCAT TGTTTGGTTC CACTTCTTGT TTTGTTGCAT ATGTATTGAC CATGATCTAT GTAATGAGAA CATAGGTGAA GAGAAAGTTT TTGTTCTTTA ACATTTTAAT TATAAATCAA GATGTTCAAT 
Length1460
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12646514.. 12649015
Download Sequence
A.thaliana
AGI-codeAT2G29050.1
DescriptionRHOMBOID-like 1
TAIR curator summary
Alias[ATRBL1][RBL1][RHOMBOID-like 1]
Gene coexpression
MR
MR Locus Description
5.83095 Ahg927275 mechanosensitive channel of small conductance-like 6
15.2971 Ahg899380
16.1245 Ahg937311 UDP-galactose transporter 5
19.1833 Ahg903199 HSP20-like chaperones superfamily protein
20.9762 Ahg920006 oxidoreductase, 2OG-Fe(II) oxygenase family protein
28.0891 Ahg932850 Protein of unknown function (DUF616)
32.8024 Ahg327694 transducin family protein / WD-40 repeat family protein
39.7492 Ahg495287 Sugar isomerase (SIS) family protein
50.6458 Ahg471469 ARM repeat superfamily protein
53.7773 Ahg483227 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression