Detail



ID : Ahg481940

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481940|fgenesh2_kg.4__1000__AT2G30290.1
Sequence
ATGAGGGCGA AGAATGTACG GTTAGTTGTA ATAGTATGGG TGATGGGGTG GAGTTCCTGC ACAGGGAGGT TCGTTGTGGA GAAGAACAAC CTCCGGGTGA CTTCACCGGA GTCCATCAGA GGAGTCTACG AATGCGCCCT CGGAAATTTT GGCGTCCCTC AATACGGGGG AAGCATGTCC GGTGCGGTGG TTTATCCTAA AGCTAACCAG AAAGGTTGCA AGAACTTTGA CGATTTTGAG ATCTCTTTCC GATCCAGAGT CGCTGGATTG CCCACATTCG TTCTCGTCGA TCGAGGAGAT TGTTACTTCA CTTTAAAGGC GTGGAACGCA CAACGAGCTG GTGCCGCAAC CATCTTGGTA GCGGATAACA GGCCTGAGCA ACTCATCACC ATGGACGCAC CAGAGGATGA GACGTCAGAT GCAGATTACC TACAAAATAT CACAATTCCT TCAGCATTGG TGAGCAGATC TCTAGGGAGT GCCATCAAAA CGGCCATAGC TCATGGCGAG CCCGTTCATA TAAGTCTAGA CTGGCGGGAG GCTCTTCCAC ACCCAAACGA TCGAGTAGCT GACGAGCTAT GGACCAATAG CAATGATGAA TGCGGATCCA AATGTGACGC ACAGATTGAG TTTCTCAAGA GATTCAAAGG AGCTGCTCAG ATTCTTGAGA AAGGAGGCTA CACTCGCTTC ACTCCCCACT ACATTACATG GTTTTGTCCT GAAGCATTTC TGGCAAGTAG ACAATGTAAA TCACAATGCA TCAATGGAAG ATATTGTGCT CCCGACCCGG AACAAGATTT CTCTAGAGGA TACAATGGGA AAGACGTAAT TATTCAAAAT TTACGCCAAG CTTGCTTCTT TAGAGTGACC AATGAAAGTG GAAAGCCTTG GCTTTGGTGG GATTACGTCA CCGACTTCGC CATTCGTTGT CCCATGAAAG AGGAGAAATA CAACAAGAAA TGTGCTGATC AAGTCATTCA ATCTCTTGGA GTTGATGTGA AGAAAATTGA CAAATGCATT GGAGACATTG AAGCAAATAC CGAAAATCCC GTTCTTAAAG AAGAACAAGA TGCACAAGTT GGAAAAGGTC CGCGAGGAGA TGTGACGATA CTACCAACTA TTGTGATAAA CAATAGACAA TATAGAGGGA AGTTGCAGAG ATCGGCCGTG CTTAAGGCTC TTTGCTCAGG GTTTCGTGAG ACGACTGAGC CACCAATTTG TTTAACCGAA GACATAGAAA CCAATGAGTG TTTACAAAAC AACGGAGGGT GTTGGGAAGA TAAGACAACC AACATTACAG CTTGCAGGGA CACTTTCAGA GGAAGAGTAT GTCAATGTCC CATTGTTCAA GGTGTCAAGT TTCTAGGTGA CGGTTATACA CATTGTGAAG CTTCCGGGGC ACTACGTTGT GGTATAAACA ATGGAGGGTG TTGGAAACAA ACTCAAATGG GAAAAACATA TTCTGCTTGC CGTGATGATC ATTCGAAAGG CTGCAAATGT CCCCCCGGAT TCAAAGGAGA TGGACTCAAA GACTGCCAAG ATGTGAATGA GTGTGAGGAG AAAACAGCGT GTCAATGTCG CGGTTGCAAA TGCAAGAACA CATGGGGAAG CTATGAATGT AGTTGCAGCG GAAGCTTGCT TTACATCAGA GAACACGACA TTTGCATAAA CAAAGATGCA AGAGGAGATT TAAGTTGGGG AGTGATATGG ATAATAATAA TGGGATTAGG TGCAGCTGCT TTAGGAGCTT ACACTGTTTA TAAATACAGA ATTCGGACAT ATATGGACTC AGAGATAAGA GCGATAATGG CGCAATATAT GCCTCTCGAT AACCATCCCA ACACTCAACT TTCTTCTCAA CTAGAGTTGT AA 
Length1872
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13400114.. 13402970
Download Sequence
A.thaliana
AGI-codeAT2G30290.2
DescriptionVACUOLAR SORTING RECEPTOR 2
TAIR curator summary
Alias[AtVSR2][BP80-1;2][VSR1;2][VSR2][binding protein of 80 kDa 1;2][VACUOLAR SORTING RECEPTOR 1;2][VACUOLAR SORTING RECEPTOR 2]
Gene coexpression
MR
MR Locus Description
9.8995 Ahg323966
14.9666 Ahg950383 Auxin efflux carrier family protein
17.7482 Ahg486726 VANGUARD 1 homolog 2
19.105 Ahg493352 HXXXD-type acyl-transferase family protein
20.7123 Ahg904884 RNA-binding protein
22.3607 Ahg471783
24.3721 Ahg494446 proline-rich family protein
25.219 Ahg917658 subtilase 4.13
25.807 Ahg949069 transposable element gene
27.2029 Ahg923932 WAG 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression