Detail



ID : Ahg481943

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481943|fgenesh2_kg.4__1003__AT2G30320.1
Sequence
ATGGCAGTCT CGTTTCTACG AATTCCAATT CCTTCACGGG TCTTCTGGTA CCCGACCCGA ATTATTCGGG CCACACCAGC GTTAGTACGA TTCTCTTCCT CCGCCGCATT TCAGCCGTCG TCTACTTCAC TCTCACCGTC TTCTTCCGAC AACTTTCTCG CCGATAAATG GGAATCATAT CGGAAGAAGA AGGTCGTCAT TCGAATTGGA TACGTGGGTA CTGATTACAG AGGTTTGCAG ATTCAAAGAG ACGACCCTTC TCTCAAAACT ATTGAGGGTG AATTGGAAGT TGCTATATAT AAGGCAGGTG GGATTAGAGA TAGTAACTAT GGTGATCTTC ATAAGATTGG TTGGGCTAGA AGTAGTCGAA CTGATAAAGG AGTTCATTCT TTGGCAACGT CAATATCGCT GAAAATGGAG ATCCCTGAGA CGGCGTGGAA GGATGATCCT CAGGGCACTG TTCTTGCTAA ATGCATTAGC AAGCACCTTC CCGAGAATAT CAGAGTTTTC AGTGTTTTAC CGTCAAATAG GAGATTTGAT CCCCGAAGGG AGTGTACGCT GCGGAAATAT TCTTATCTCC TCCCTGTTGA TGTTATTGGG ATCAAGAATA GCTTTACTTC AAATGAGATT GACTATCACA TTACGGATTT TAATAAAATT CTAAATGAAT TTGAGGGTGA ATATCCTTTC CATAACTATA CACAGCGGTC ACGGTACAGA AGGAAATCGG AACAAAAAAT AAAACAAAGA AACGGACGCC CTCCAAGAAT ACCAAAAGCA ATCAAAGCAT CAGAATCAGA GTTTACAGAG GAGAACCACA GAGAAATTGA AGAAGAAGAA GAAAAAGAAA TGGATGGCGA ATCTGATGAA CATATTCCTC CTGATTCTGA TAATTCTCAG GTGAACAGCC GTGCAAAATG GCTTTACGAG CCAGATGAGA CAGATAAGCT GAGTGGTGCT CATTTCAGAA AAGTGTTTCG ATGTCGTAGT GGAAAGCTAG AGAATTCACT TGGATTCGGC TTTGTCGAGA TCTCCATATG GGGAGAATCA TTCATGTTGC ATCAGATACG GAAGATGATT GGAACGGCCG TGGCAGTGAA GAGAGAGCTG CTTCCTAGAG ACATCATAAG ACTATCTCTA AACAAGTTCA CAAGAATCGT TTTGCCTCTT GCTCCATCTG AAGTACTAAT CCTGAGAGGA AACAGTTTCG AAGTGCGTAG ATTGCCTGAG AGGCCGGGGA CGGAAGCAAC GGTTGAATCA GAAGAAGTTG AGAAGGAAAT AGAGGAGTTT TACAGAGCAG TGATGGTTCC ACAGGTGAGT AGATTCTTGG ATTCTGAGAA ATCTCCATGG AAAGAGTGGG TGGAGCATTT AGATAGGAAT GATGGTTTGA TAGACGAGGA ACTGGAAGAT GTAAGGAAAG GTTGGGAGGA GTGGAAAGCC GCGAAGCCAT GGATGAATTT GAAGAAGACA GAAGATGGTG AAGAAGTGAG TTCTGTTTCA GTACCTATTC ATCAAGCTCT ATGA 
Length1524
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13437615.. 13439769
Download Sequence
A.thaliana
AGI-codeAT2G30320.1
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg328395 Pectin lyase-like superfamily protein
7.34847 Ahg890991 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
15.7162 Ahg330455 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
22.4499 Ahg486983 Mitochondrial glycoprotein family protein
23.4521 Ahg485806 fructokinase-like 1
24.6577 Ahg946342 Pentatricopeptide repeat (PPR) superfamily protein
29.1548 Ahg491032 cold shock domain protein 1
30.8869 Ahg932388 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
31.8119 Ahg932772 haloacid dehalogenase-like hydrolase family protein
39.598 Ahg909198
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression