Detail



ID : Ahg932388

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932388|scaffold_400376.1
Sequence
TGACTTTCTC CACCTCTCAT TATGACTTCC ACTCACCGTC TTCTTCCTCC TCTCGGAGCA TCGCTCACTA GAGGAAGATT TTCTTCCGAT CAAATCCGAA ATGGTTTTCT AAGAAGTTTC CGAGGATTCG CCACCGTTAC TTCGTCGGAG CCGGCGTTAG CTAATCTGGA AGCGAAATGT GCCGTTGCGA TTCCGGAATG TTCTACAGTA GAAGACGAGA TCACGAAGAT CCGTCACGAA TTCGAGTTGG CGAAACAGAG GTTTCTTAAT ATCCCTGAAG CTATTAATAG TATGCCTAAG ATGAATCCTC AAGGGATATA TGTGAATAAG AATCTGAGAT TGGATAATAT ACAAGTTTAT GGATTTGATT ATGATTACAC TTTGGCGCAT TACTCATCTC ATTTACAGAG TTTGATCTAT GATCTTGCTA AGCAACACAT GGTTAATGAG TTTCGATATC CTGATGTTTG CATTCAGTTT AAGTATGATC CTACTTTTCC TATCCGCGGG TTGTACTATG ATAAACTAAA AGGATGCCTT ATGAAATTGG ATTTCTTTGG TTCAATCGAG CCAGACGGGT GTTATTTTGG TCGTCGTAAG CTTAGTAGGA AGGAAATAGA AAGTATGTAT GGAACGCGAC ACATAGGTCG TGATCAAGCG AGAGGTCTGG TGGGATTGAT GGATTTCTTC TGTTTCAGCG AGGCCTGTCT TATTGCAGAC ATGGTTCAAT ACTTTGTTGA CGCCAAACTT GAGTTTGATG CCTCTAACAT CTACAATGAT GTCAATCGTG CTATTCAACA TGTCCATAGA AGTGGATTGG TTCATAGAGG AATTCTTGCT GATCCCTACA GATATTTGCT GAAAAATGGT CAGCTTCTAC GTTTCCTGAG AATGCTAAAA GATAAAGGAA AGAAGCTTTT TTTGCTGACC AACTCTCCGT ATCATTTTGT CGATGGCGGA ATGCGCTTTC TAATGGAGGA CTCTTTTGGC CTCAGAGATT CCTGGCGAGA GCTCTTTGAT GTTGTTATTG CTAAAGCAAA TAAACCAGAA TTTTACACAT CTGAGCACCC TTTCCGTTGT TACGATTCGG TGGGGGATAA TTTGGCATTT ACAAAAGTGG ATGCATTTGA CCCAAAGAAA GTTTACTACC ATGGCTGTCT TAAATCCTTC CTTGAAATCA CAAAGTGGCA TGGCCCTGAG GTGATTTATT TCGGAGATCA CTTATTTAGT GATCTAAGAG GGCCTTCAAA AGCTGGTTGG CGAACTGCTG CCATAATTCA TGAGCTTGAG CGAGAGATAC AGATACAAAA TGATGATAGC TACCGGTTTG AGCAGGCCAA GTTCCATATT ATCCAAGAGC TACTTGGTAG ATTTCATGCG ACTGTATCAA ACAATCAGAG AAGCGAAGCA TGCCAATCTC TATTGGATGA GCTGAACAAT GCGAGACAGA GAGCACGAGA CACGATGAAA CAAATGTTCA ACAGATCGTT CGGAGCTACA TTTGTCACAG ACACTGGTCA AGAATCAGCA TTCTCTTATC ACATCCACCA ATATGCAGAC GTTTACACCA GTAAACCTGA GAACTTTCTG TTATACCGAC CCGAAGCCTG GCTTCACGTT CCTTACGATA TCAAGATCAT GCCACATCAT GTCAAGGTTG CTTCAAACCT TTTCAAAACC TGAGATTGGT TTCATTCCTC TAAG 
Length1704
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2023769.. 2026794
Download Sequence
A.thaliana
AGI-codeAT2G23890.1
DescriptionHAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.6274 Ahg490266 GTP binding Elongation factor Tu family protein
23.2379 Ahg927712 Pentatricopeptide repeat (PPR) superfamily protein
30.8869 Ahg481943 Pseudouridine synthase family protein
37.8946 Ahg921543 Ribosomal protein L16p/L10e family protein
39.5221 Ahg493491 Pentatricopeptide repeat (PPR) superfamily protein
40.7185 Ahg909999 GTP binding Elongation factor Tu family protein
42.2137 Ahg900722 RNApolymerase 14 kDa subunit
45.5961 Ahg491807 arginine methyltransferase 11
60.8605 Ahg485276 Transducin/WD40 repeat-like superfamily protein
61.4003 Ahg893605 AAA-type ATPase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression