Detail


ID : Ahg482428

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482428|fgenesh2_kg.4__1488__AT2G34640.1
Sequence
AGGAGATAAA TGGATAAACC CAAAAACTGA CAAGTGAAAA CCTTTCGAAG CCAAAAAAAC TCCTTCAAAA TCAACGTCCA TGATAGAAAA ACCTCTTCCA ACATAATCTC CTGGTAAAAC AAAAAGAAAT GATACAGTGG GAGTGTAATG GCGTCAATAT CAACCACCAC TTGGCTCTAC CGAGGTAAAG TAGGCACAGA GATTGGAAAG TCCAGTAATT GTCTTGTGCA GAGACGGGTT AAATGTGGAT TTCCAATCAA GACATTACAT GTCGGGATTA CTTCTGGGGA TCTGTCATTG CGACATTGTA TCAAATGTAA GAAAGGGGAT GGAGATGGTG ATGCAAGTGA AGGCACTAAA AAGAGTGAAG AAGGATTTGA TTATGTGACT GTTGAGAGGC CTCCTTACTA TAGTTATATG GATTCAACTT CTGGGAAACT CGAGCCAGCG TCGGGGGCTC GGGCTAGTAT TCCAGGTGAA GATTATTGGC CTGAAGGAAC TTCGAGCCGG GTTAGAGCTG CTAGGGCTCC TCAACCAGCT GGTGAGTCTT CGAGTTTCCC TTCGTATGGA AAAAATCCTG GAAGTAGGAG AAAGAAGAAT CGGAAAGCAA CTGAGGAGAA TGTGACTGTT GAAACGAATG ATGAAGTATC AGATTCTGAG GATAGCTCTG AAGAAGAGGA AAATGATTCC TCGGACGGGT TTGTTACCTA TAACAATGAA TTTGAGAGAG AAGAAGAGGA GAGTGGTTTC GAATTAGACA AAAAGCTTGG GCGGCCACAT CCTTTCATCG ATCCTACGAA AAAGAAACAA ATCGAAAAGA CACTCACGGG CGATGAATCG TGGTGGAACT GGAGGAAACC GGAGAAAGAA CAATGGTCAA GATGGCAAAG AAGACGTCCT GATGTTGAAA CGGTTTTTCT CAAGGCAATG GCAGAAACAG GACAAGTGAA GCTCTATGGG AAAGAACCAA CACTCACAGA AACTTCTCTT TATAGAGCAA GAAGGCATCT TTTCAAGGAA GAGAGGCTGC AAGCTGAGCG AGAGAGATTA GCTAAAGAAG GTCCAATGGC TTTTTATTCT GAATGGGTTA AAGCATGGAA GAGAGATACG TCGCGAGAAG CTGTACAGAA ACATTTTGAA GAGACAGGTG AAGATGAAAA CACACAACTG ATTGAGATGT TCTCTCATCA AACAGATCGA GAATACCGGA TAATGATGGG AACTGATATT AGGATCAAGA GAGATCCTTT GGCAATGCGG ATGAGGGAGG ATCAAATTAA GCAAATTTGG GGCGGGGATC CAGTTTACCC GACAATTAAC TACATTCAAG ATCCTAATGC GGTTATGGAT TTCAGAGGAC CCGATTTTCA TGAGCCGACA CCAAATATGC TTTCTTATTT AAAAGAGAAT GGCAAAGTCA TCTCAAGAGA GATGCATGAA GCACTACTAA CTAAAGAAAA AACTGAGCAG CTCGAGGTGC CTGACATTGA TGATGCAATG GCACAAGCTG TTGATATTGG TGAAAACGAT GACGAGGAAG ATGATGCAGA TGTAGAAAAA GACGACGAGA AAGTGCTGAG GAATTGGAGT GTCTTGAAGA GTACCCCTGA GCTTCGCACC GCCAAGCCTA CACCAAAGAA GGAAGGTCGG ATGTCTCTAG ACGAGGCCGT GGATGATTCT GAGAACTTAA CTGATTTTCT CATGGACTTT GAAGAGGAAA CTGATCCTTA AACCCCGGTT TTTGTATTTC TATGTAAAGA CTTTGGCTTG TATACTTGGA AGGGATTGTA TCATTTAGGA GTGAATT
Length1807
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15547238.. 15549964
Download Sequence
A.thaliana
AGI-codeAT2G34640.1
Descriptionplastid transcriptionally active 12
TAIR curator summaryPresent in transcriptionally active plastid chromosomes. Involved in plastid gene expression.
Alias[HMR][PTAC12][TAC12][HEMERA][plastid transcriptionally active 12]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg937609 Nucleic acid-binding, OB-fold-like protein
9.79796 Ahg476044 fructokinase-like 2
10 Ahg485806 fructokinase-like 1
11.6189 Ahg949656 Fe superoxide dismutase 2
14.1421 Ahg494908
14.5258 Ahg941581 Ribosomal protein S8e family protein
16.3707 Ahg940561 mraW methylase family protein
17.1464 Ahg478403 DNA GYRASE A
20.1494 Ahg489192 Fe superoxide dismutase 3
22.2261 Ahg473757 ribosomal protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression