Detail



ID : Ahg949656

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949656|scaffold_801543.1
Sequence
TCAGTAACGC TTTGAGGAAA GATGACGAGT GTTGCAGTGA CAGCAATTTC CTCATCTCTC TCGTGCTCTC CTCTGCTGCT TCCTTCTCAA GGGCCAAAAC TGCGAATGCA ATGGAAAAGA AACGATAAGA GACAGTTCTC GAGAAAGGTG GCTGTTTCCG GTGTAATCAC TGCGGGGTTT GAGCTGAAGC CGCCTCCTTA TCCTCTTGAT GCTCTGGAAC CGCATATGAG CCGGGAAACC TTGGATTATC ACTGGGGCAA ACATCACAGA ACTTACGTAG AGAATCTGAA CAAGCAAATC GTAGGCACAG ATCTAGATAT ACTGCCCTTA GAAGAAGTTG TGCTTCTTTC ATACAACAGA GGCAATATGC TTCCTGCCTT CAACAACGCA GCACAGGCTT GGAACCACGA CTTCTTCTGG GAGTCTATCC AACCTGGAGG TGGAGGAAAG CCAACTGGAG AGCTCCTCAG ATTAATAGAG AGAGATTTCG GATCTTTCGA AGAGTTTTTG GAAAGGTTCA AGTCGGCTGC AGCTTCTAAT TTTGGTTCGG GTTGGACATG GCTTGCATAT AAGGCGAATA GACTTGACGT TGCAAATGCC GTAAATCCAC TCCCAAAGGA GGAAGACAAG AAGCTTGTAA TAGTGAAGAC GCCCAATGCA GTAAATCCGC TTGTATGGGA TTATTCTCCA CTTCTCACCA TTGATACCTG GGAGCACGCT TACTATCTGG ATTTTGAGAA CCGAAGAGCT GAATACATAA ATACATTCAT GGAAAGGCTT GTATCATGGG AAACTGTAAG CACAAGGTTG GAATCCGCAA TGGCTCGAGC AGTGCAAAGA GAACAAGAAG GAACAGAGAC AGAGGATGAA GAGAATCCAG ATGACGAAGA GCCAGAGGTC TATTTAGATA GTGATATCGA TGTATCTGAG GTTGACTAAA ACTTGTGAAG TAATAACAT 
Length959
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13500344.. 13502715
Download Sequence
A.thaliana
AGI-codeAT5G51100.1
DescriptionFe superoxide dismutase 2
TAIR curator summaryFe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.
Alias[FSD2][Fe superoxide dismutase 2]
Gene coexpression
MR
MR Locus Description
11.6189 Ahg482428 plastid transcriptionally active 12
17.8045 Ahg483266 Ribosomal protein S5 family protein
19.4936 Ahg487244 biotin F
21.8632 Ahg493389 Ribosomal L27e protein family
28.9828 Ahg938259 Tetratricopeptide repeat (TPR)-like superfamily protein
32.1714 Ahg941581 Ribosomal protein S8e family protein
32.2025 Ahg937609 Nucleic acid-binding, OB-fold-like protein
32.311 Ahg492065 Met-10+ like family protein
38.7943 Ahg475311 DEA(D/H)-box RNA helicase family protein
41.3763 Ahg496177 GTP binding Elongation factor Tu family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression