Detail



ID : Ahg482586

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482586|fgenesh2_kg.4__1646__AT2G36100.1
Sequence
ACACAAAGAA CACACTTTCT CTTTCTTTTA AACCCCAATT GCAAGAGAAA ATGGCGAAAG AGTCCACCAC CATTGACGTC GGCGAGCCAA GCACTGTCAC CAAAAGTTCA AGCCATGTCG TGAAGAAGAA GGGCTTCGTG GCAGCCGCCG CAGGAGGTGG TGCCAAGAGA GGTTTAGCCA TATTCGATTT CCTCCTCCGT TTGGCGGCCA TAGGAGTCAC CATCGGAGCT GCCTCTGTCA TGTACACCGC CCAGGAGACT CTTCCCTTCT TTACTCAGTT CCTCCAGTTC CAAGCCGGTT ACGATGACCT TCCTGCATTT CAGTACTTTG TGATAGCCGT AGCCATAGTC GCTAGCTATC TCGTCCTTTC ACTTCCATTC TCCATCGTAA CTATTGTCCG TCCACTCGCT GTCGCGCCTC GGCTGATCCT CCTCATCTTC GATACTTTGG TCGTGACGCT CAACACATCA GCAGCAGCAG CCGCAGCATC AATCGTCTAC CTTGCACACA ACGGCAACCA AAGCACCAAC TGGCTCCCTA TCTGTCAGCA GTTTGGAGAC TTTTGCCAAA ACGTGAGCAC CGCTGTTGTA GCAGCTTCTA TCGCGATTCT CTTCTTCATT GTTCTCATCA TCATCTCCGC CATCGCCCTC AAGAGGCACT GATTTCATCT TTTTTAAGTG TCAAGATCGT AATGTACTTG TTGTATATGT TTGTGGCTTT GTGTAACATG ACAATTGGTA TTATTGTGTG AAAATGTAAT TGAAGTTGTT TATGTTTTTT AAAAGAAATT TGACTTTTGG TTTAACTTAA AAGCT 
Length815
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16240975.. 16242096
Download Sequence
A.thaliana
AGI-codeAT2G36100.1
DescriptionUncharacterised protein family (UPF0497)
TAIR curator summary
Alias[CASP1][Casparian strip membrane domain protein 1]
Gene coexpression
MR
MR Locus Description
11.6619 Ahg898732
15.5885 Ahg336237 F-box family protein
47.3814 Ahg487420 sucrose-proton symporter 7
50.4579 Ahg358240 tetraspanin4
66.9925 Ahg481068 Galactose oxidase/kelch repeat superfamily protein
69.9786 Ahg932115 Protein of unknown function (DUF784)
72.2911 Ahg495243 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
83.8749 Ahg887450
84.4038 Ahg918304 K-box region and MADS-box transcription factor family protein
84.8351 Ahg334030 sugar transporter 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression