Detail



ID : Ahg918304

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918304|Al_scaffold_0008_3055
Sequence
ATGGGAAGAA GAAAAGTGGA GATCAAACGA ATTGAGAACA AAAGCTCTCG ACAAGTTACT TTCTGTAAGC GACGAAATGG ACTCATGGAG AAAGCTCGTC AACTCTCAAT TCTCTGTGAA TCCTCCGTCG CTCTTATCAT CATCTCTGCC ACCGGAAGAC TCTACAGCTT CTCCTCTGGC GATAGCATGG CCAAGATCCT CAGTCGTTAT GAATTACAAC AGGCTGATGA TCTTAAAACC TTGTGCCTTA ACATTGTGGA TAAAGACCAG GATAGAGATA CTCTGTTCTT CACAGCTGGT ATTGCACTAG AAAGTCTACG ACATGGTTCT AAACTTGTAG ATCTAGAAGA AAAAAATCTT AATTATCTTT CACACAAGGA GTTGCTAGAA ATAATCCAAT GCAAGATTGA AGAAACGAAA AGCGATAATG TAAGTATAGA TTGTCTAAAG TCCCTGGAAG AGCAGATCAA GACTGCTCTG TCTATAACTA GAGCTAGGAA GGCAGAACTC ACGATGGAGT TTGTGAAGAC CCTTCAAGAG AAGGAGAAGC TGCTGATAGA AGAGAACCAG GTTTTGACAA GCCAGCTTAA AAAGATGGGG AAGATGAAGA AGTCTAGGGA AACAGAGGAT GCAAGAGCAA TGTCACCCGA AAATAGTTCC CGAAACAAGC CACCGGAGAC TCTCCTGCTG CTCAAGTAA 
Length699
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20438842.. 20443603
Download Sequence
A.thaliana
AGI-codeAT5G65070.3
DescriptionK-box region and MADS-box transcription factor family protein
TAIR curator summaryEncodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization.
Alias[AGL69][FCL4][MAF4][AGAMOUS-like 69][MADS AFFECTING FLOWERING 4]
Gene coexpression
MR
MR Locus Description
8.60233 Ahg907331 Mannose-binding lectin superfamily protein
20.4695 Ahg484455 AP2/B3-like transcriptional factor family protein
20.7364 Ahg479118 DEGP protease 12
35.7071 Ahg924296
38.9872 Ahg921555 FBD, F-box and Leucine Rich Repeat domains containing protein
43.1277 Ahg480556 glycosyl hydrolase family 35 protein
49.6387 Ahg344097
50.1996 Ahg925744
51.0882 Ahg351609 Protein of Unknown Function (DUF239)
56.3649 Ahg930559 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression