| Annotation |
|---|
| Description | jgi|Araly1|483086|fgenesh2_kg.4__2146__AT2G40320.1 |
| Sequence |
AGTAATTCTT GAAGCAATGC CAAAATAAGT TCTTTTGGCT TCCTCTTCCC ACATCTTATT TGGTTGAGGA GAATGAGATC ATCAAGAACC CAAAGTGTTC ATTTCTTAAT TTTATCTTCT CTTTTCCTAA TTATATAAAA TTTGAACACT GAAATCACAT TTGTAACACT CATTCTCAAT CCTAAACATG AAACCTTCAT CACCAATTTC ACTCGCTACT TCTTCAATTG CTAGAAAAAC TCGTCTTTCA CCTTATCTCT TCACACTCTT AGCTTTTATC CTCTTCGTCT CTGTCCTCTA TGGTGAAGAT TTCATGTGCA TATTTGGACA GCTCGAGCCT AACTTTGTCC TCCCGCCTTC TCGAACAACC GAGAAGAACA AGAAGTCAGA GAAGCTTGCG TTTTCTATTG GTAAAACAGA AGAAAGTTGT GACGTTTTCA GCGGGAAGTG GGTGAGAGAT GAAGTCTCCC GACCACCGTA CGAAGAATGG GAGTGTCCGT ACATTCAACC TCAGCTTACG TGTCAAGAAC ACGGCCGTCC CGACAAAGAT TACCAATTCT GGCGGTGGCA ACCCAATCAT TGCGATCTTC CCTCGTTCAA CGCGTCGCTG ATGCTGGAGA CATTGAGAGG GAAGAGGATG ATGTATGTAG GAGACTCATT AAACCGTGGA ATGTTTGTAT CGATGATTTG TCTTCTTCAT CGTCTTATCC CTGAAGATCA GAAATCAATC AAAACCAATG GTTCCCTCAC TGTCTTCACT GCCAAGGAGT ATAACGCGAC GATAGAGTTC TATTGGGCAC CGTTTCTTCT AGAATCGAAT TCAGACGATG CAATTGTCCA TAGAATATCG GATAGGGTTG TGAGAAAAGG ATCAATTAAC AAACATGGAC GGCACTGGAA AGGCGTCGAT ATAATCGTAT TCAACACTTA TCTATGGTGG ATGACTGGAT TGAAGATGAA CATCTTGCAA GGATCGTTTG CCGATAAAGA GAAGAATATC GTGGAGGTTT CGACTGAAGA TGCATACCGG ATGGGTATGA AGAGTATGTT GAGATGGGTG AAGAACAATA TGGATCGTAA GAAAACTAGG GTTTTCTTCA CAAGCATGTC TCCTACTCAT GCCAAGGGCA TAGATTGGGG AGGTGGACCG GGTCAGAATT GCTATAATCA GACAACACTA ATAGAAGATC CGAGCTATTG GGGATCAGAT TGTCGGAAAA GTATAATGAA AGTGATTGGA GAAGTGTTTG GAAGATCGAA AACACCAATA ACGTTACTGA ACATAACGCA GATGTCGAAT TATAGGAAAG ATGCTCATAC GTCGATATAC AAGAAGCAGT GGAGTCCACT TACAGCGGAG CAGCTGGAGA ATCCAACGAG CTATGCGGAT TGTGTACACT GGTGCTTGCC TGGCCTTCAA GATACTTGGA ATGAGCTTCT CTTTGCTAAA CTTTTCTATC CTTGAGAGAA GAGAACATCT TTTTGGTTTT AGATTTTGGA AAGAGATATT GTCGAGAAAT TGTAAAATGT AGTCATTGAA TTGATATTGT CT |
| Length | 1552 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 18675296.. 18677412 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G40320.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 33 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL33][TRICHOME BIREFRINGENCE-LIKE 33] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 24.8193 |
Ahg473383 | other RNA |
| 40.1497 |
Ahg324343 | |
| 42 |
Ahg930468 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 50.7346 |
Ahg479545 | Protein of unknown function (DUF1666) |
| 51.1566 |
Ahg338071 | GRAS family transcription factor |
| 53.6656 |
Ahg489407 | Ran BP2/NZF zinc finger-like superfamily protein |
| 81.6701 |
Ahg482815 | Laccase/Diphenol oxidase family protein |
| 88.0227 |
Ahg485694 | Pectin lyase-like superfamily protein |
| 88.9944 |
Ahg922113 | root FNR 2 |
| 91.913 |
Ahg925145 | formin homology 2 domain-containing protein / FH2 domain-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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