Detail



ID : Ahg483247

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483247|fgenesh2_kg.4__2307__AT2G41460.1
Sequence
TTTCTGGTGG TGCCTATTAG GAGTTTAAGC GTTGGTTCAT CTATCGTTGG TGTTGGAGTA GGAACGAGAA GTGTCAACAA GAGGCTTATG TCAAATGCTA CAGTTAAATC TATACCTTTC TCTATCAACA ACAGCAAGGG AAAGGAGGTA CTCAAGATAG TAGGAGCAGC TACTGATCAG AATTGTCAAC AGATGGGAAG TGATAGTGGT AGAGCTGAAA TGGGAACTCT TCAAGATGAT CAAAAGGATA TCGAGGCGAT GACGGTTCAA GAACTTAGAG CCACATTGAG GCAAGAAACT TGGGCTACCT GTGAAAGGAC GCAAACAAGA ACTTATCTCA ACTTTACGAC TTCATATGGA CAGCAATTTA CCTGGTATGT AACTGCACAC CAAGAACACA CACTTTTCTA TTTCATCAAA TTCATTCAAA AAGAGGAAGC ATCATCGATC ATCTCTAGTG AATTTCTGAA AACCAAAGAA ATAATCGTAT CCCCGAGTCA AACCTCAGAA CCCTGGGCTG TACTTGCTCA TACGAAGCCT CAGAAGGACT GGAAAGCTTA TAACCCAAAG ACAATGAGAC CCCCCTACCA GAGGATAACC AAGTGTGTGA AGGTTAATGG ATTGAGAGCA TTGTTGAAGT TAGAGAGCTT CTCTGCTCTG CAGCTTGCCC AAAGAAAAAA TATTGATATC TTGTGCTTGC AGGAGACTAA AATCCAGGTA AAGGATGTTG AGGAAATTAA GAAAACTCTT ATTGATGGCT ATGATCATAG TTTCTGGTCC TGCAGCGTCT CGAAACTTGG CTACTCTGGA ACTGCAATAA TCTCACGGTT AGATATAGCA CTGGGGCTTA TTGTAACTGC TGAATTCGAC TCCTTCTATT TGATAAATAC TTATGTCCCT AATTCCGGAG ATGGCTTAAA AAGACTGTCA TACAGGATCG AAGAATGGGA TCGAACCCTC AGCAATCACA TCAAAGAGCT GGAAAAGTCT AAGCCTGTAG TCTTGACGGG TGATCTAAAT TGCGCTCATG AAGAAATTGA CGTCTTCAAT CCTGCGGGGA ACAAAAGAAG TGCTGGTTTT ACAATAGAAG AAAGGCAGTC CTTTGGTGCA AACTTCTTAG CCAAGGGCTT TGTAGATACA TTTAGAAAGC AACATCTTGG TGTTGTCGGT TACACTTATT GGGGTTATCG CCATCCATGG TGGCCGCAAA ACCAACAAAG ATTCATATGT TTGGTTTCTA AACTGGTGAA ATGGTCGATC ATTGCCTCCA TTGGCCTTAT TCTCAAGCTC TGATTTATTC AAAGTTTCAC CATTCCCAGC TTTTTTTTTG GCTAAAGTCT TTAGTAGCTT TTAGGTAGAG ATTCACAGGT TTTGTTTCTA GAGAGAGCTT GCTCATGTAA AATATCTATC AGTAAACAGG CGCCAAACAA TCTGAGTCTT GTCC 
Length1444
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19327103.. 19329547
Download Sequence
A.thaliana
AGI-codeAT2G41460.1
Descriptionapurinic endonuclease-redox protein
TAIR curator summaryapurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.
Alias[ARP][apurinic endonuclease-redox protein]
Gene coexpression
MR
MR Locus Description
12.4097 Ahg321778 F-box and associated interaction domains-containing protein
60.4979 Ahg489460
62.2013 Ahg482244 receptor like protein 27
71.1337 Ahg950808 4-hydroxy-3-methylbut-2-enyl diphosphate synthase
81.7557 Ahg894281 ferric reduction oxidase 4
88.6566 Ahg322445
97.6985 Ahg892013 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression