Detail



ID : Ahg483321

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483321|fgenesh2_kg.4__2381__AT2G42300.1
Sequence
GGCTTTATTA ACAGACGCAC TCCAAAGCTA ACGTTGCTTT CTTCCCACTC CAAAACGAAG ACGAAGACTT TTTTTTTTAA TTCCGCCATT GATGCAACCT CAAAATACTC GCCAACTGAC AAACATTAAA CTCCTTCTCC TCTCTCGATT TAAAGAAGCT TAACTCGAAC CAGTTGATCA AGTCGGTCGG TTCTGGGTTT CTCTGAATTT CAACTCGGTT TATTCCGGTT TAAGTGTGAT TTTCCCGGCT TATGGATCTA ACCCAAGGCT TCGGAGCTAG ATCCGGCGTT GTTGGGCCGG TGACCGGACT TGAATCTCTC AATTTTAGCG ACGAATTTCG GCACTTAGTG ACGACGATGC CTCCGGAGAA TACCGGCGGC TCTTTCACGG CTTTGCTCGA GATGCCTGTG ACTCAAGCCA TGGAGCTTCT CCATTTCACT GATTCATCGT CTTCTCAGGC GAGAACCGTT ACCGGAGATA TTGCTCCTAC TACTCTTCAC CCTTTCGGGG CATTGACTTT TCCTTCTAAC TCGCTTCTCT TGGACCGCGC CGCTCGTTTC TCGGTGATTG CTACTGAGCA AAACTGTAAT ATCTCCGGCG AGACTGCGAA CTCTTTACCT TCCAATTCCG GCGCCAATCT GGACAGAGTC AAGGCTGAGC CTGCTGAGAC CGATTCAATG GTGGAGAATC AGAACCAGAA CTACTCTTCT GGAAAGAGGA AAGATCGCGA GAAGAAGGTC AAAAGCTCGA CGAAGAAGAC CAAGAGCTCC GCAGAGTCAG ACAAGTTGCC ATATGTTCAT GTCAGAGCTC GTCGTGGTCA AGCTACTGAT AACCATAGCT TAGCAGAGAG AGCAAGAAGG GAGAAGATAA ACGCACGAAT GAAGCTGCTA CAGGAACTGG TCCCAGGCTG TGATAAGATT CAGGGCACAG CATTGGTTCT GGATGAAATC ATAAACCATG TGCAGTCTTT ACAGCGTCAA GTGGAGATGC TATCTATGAG ACTTGCTGCA GTAAACCCCA GAGTCGAGTT CAATCTAGAC AGCATACTGG CTTCAGAAAA CGGCTCTCTT ATGGATGGTA GCTTCAATGG AGAGTCTTAT CATCAGCTGC AACAGTGGCC TTTCGATGGC TACCACCAGC CGGAATGGGG AAGAGAAGAA GATCAACATC AAGCCAATTT CTCAATGGGT TCAGCTACTT TACACCCAAA TCAGGTGAAA ATGGAGCTCT AAGTTGGAAA CAGTTTGACA TGCTTATGTA TATATATAAG AGTTATATAT CTGCTAAAGT TTCGATTGTT GAATTAGAGG GAGAAAATGG TTATGATTGT TTCAGGTCTT TGTTCATGGC CTTCTATATT TACTAGATTC CTCAATGTAG AATTCAGAAT GTCTCAATTG TGTTTCCCTT GAGAGAAAGT ATATGAAGAT TTGAT 
Length1435
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19609226.. 19613071
Download Sequence
A.thaliana
AGI-codeAT2G42300.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.1803 Ahg479888 xyloglucan endotransglucosylase/hydrolase 16
30.2324 Ahg481360 early nodulin-like protein 14
47.4342 Ahg493567 RNA binding (RRM/RBD/RNP motifs) family protein
48.0625 Ahg941090 NSP-interacting kinase 1
49.3964 Ahg480606 EXORDIUM like 5
50.1597 Ahg897276
50.319 Ahg490240 xyloglucan endotransglucosylase/hydrolase 9
52.5928 Ahg489947 HMG (high mobility group) box protein
53.8609 Ahg481491 Leucine-rich receptor-like protein kinase family protein
56.0357 Ahg948624 DNA glycosylase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression