| Annotation |
|---|
| Description | jgi|Araly1|483351|fgenesh2_kg.4__2411__AT2G42570.1 |
| Sequence |
CATGTGATGT GAACAATCTC ACTCTCTTTC TCTATCTCTC TTTTGAGTTT CTTGGAGTAT TATATAACAA ATCAGTCCAA GGCACCTCTT TTCTCACACC AATCTCGCTC TCACCAAAAA ACAGAGAATC TCAATCTCAG ATCGAAGAAA CATAGTGAGA GAGAGAATGG GTTTCACTTC CCGAGGAAAC CCTTCTTTTC TCTTCTTCTT CTTCTTTCTC TGTCTCTCCA CAGTCTCTGC TTACATCAAC AACACAAGCA GCAACAATGG AGAAGCAAGA AGAGAGCTAG CTTCTGGGAG ATGTAATTGG TTTAGAGGGA ATTGGGTTTA TGATGCAAAG TATCCACTTT ATGATCCTTA TAAATGTCCA TTCATAGATC CACAGTTTAA CTGTAAGAAG TATGGTCGTC CTGACAATGC TTACCTTAAG TTTAGATGGC AACCATCTTC TTGCTCTCTC CCCAGATTCA ATGGGTTGTA TTTCTTGAGG AGGATGAGAG GGAAGAAGAT AATGTTCGTT GGAGATTCAC TAAGCACTAA CATGTGGCAA TCTCTTGCTT GTCTAATTCA CTCTTGGGTT CCTAACACTC GTTACACTCT TCTTCGCCAA AAGGGTCTCG CTTCACTTAC CTTTGAGGAA TACGGAGTGA CGTTGTTGCT ATACAGAACA CAGTTCTTAG TAGATTTGAA TGTGGAGAAA GTTGGGAGAG TTCTTAAGCT AGATTCCATT AAGCAAGGCA ACATGTGGAG AGGCATGGAC GTTTTGATTT TCAACTCGTG GCATTGGTGG ACACACACCG AACACATTCA GCCGTGGGAT TACATGGAAG ATGGGAATAG ATTGTACAAA GACATGAACC GGCTCGTTGC TTTCTATAAA GGAATGACCA CTTGGGCTCG ATGGGTTAAT ACTTACGTCG ATCCTTCTAA GACTAAAGTC TTCTTCAACG GCGTGTCTCC TACTCATTAC GAGGGAAAGG ATTGGGGAGA GCCAATGAAC TCATGTAAGA GTCAGACGCA GCCATTTTAC GGGAGGAAGT ATCCAGGAGG GACACCAATG GCTTGGGTAG TTTTAAACAA AGTGATGAGG AGATTGAAGA AACCGGTCCA TTGGCTAGAT ATAACCGGTC TGTCTCAGCT TCGTAAAGAT GGTCATCCTT CTGCTTTCAG TGGGAACCAT CCTGGTAACG ACTGCAGCCA TTGGTGTCTT CCTGGTTTGC CTGATACTTG GAACTTGCTC TTTTACTCTA CTCTTTTCTC TTACTAACTT TCTCATCAAT GTATAAGTTA ACTTAAAGCA ACAATCAATT ATTTTTAGTT ATCTTTTTGA TTCTTGACTG AAATAACTCT TTAATAAGAC CAACGCACTT GACTCTGTG |
| Length | 1379 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19772688.. 19775498 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G42570.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 39 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL39][TRICHOME BIREFRINGENCE-LIKE 39] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.7986 |
Ahg477690 | Li-tolerant lipase 1 |
| 16.9706 |
Ahg494701 | Leucine-rich repeat protein kinase family protein |
| 20.5426 |
Ahg470654 | Fatty acid desaturase family protein |
| 23.8747 |
Ahg477440 | serine carboxypeptidase-like 25 |
| 30 |
Ahg928283 | Expressed protein |
| 30.0998 |
Ahg482818 | glycerol-3-phosphate acyltransferase 6 |
| 31.241 |
Ahg481491 | Leucine-rich receptor-like protein kinase family protein |
| 33.7639 |
Ahg346489 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 38.3667 |
Ahg945124 | glycine-rich protein |
| 41.0244 |
Ahg488793 | Heavy metal transport/detoxification superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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