Detail



ID : Ahg483371

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483371|fgenesh2_kg.4__2431__AT2G42740.1
Sequence
CTCCGTCTCT CCTTTCCCGT CGGCCGGTGA TAAATTCGCA ACCCAAATCC CTAATGGCGT CGGAGAAGAA GCTATCGAAC CCAATGAGGG ACATCAAAGT GCAGAAGCTG GTGCTCAACA TCTCCGTTGG TGAGAGTGGA GATCGTCTCA CCAGAGCTTC CAAGGTTTTG GAACAATTGA GTGGTCAGGC TCCTGTTTTC TCCAAAGCTA GATACACTGT TCGTTCTTTT GGTACCAGAC GTAACGAGAA GATCGCATGC TATGTTACTG TCAGAGGTGA GAAGGCAATG CAACTACTTG AAAGTGGATT GAAAGTTAAG GAATACGTAC TTCTCAGAAG AAACTTCAGT GACACTGGTT CCTTCGGTTT TGGTATTCAA GAACACATTG ATTTGGGTAT CAAGTATGAT CCATCAACTG GAATCTACGG TATGGACTTC TATGTAGTCC TAGAACGTCC TGGTTACCGT GTGGCACGTC GCAGAAGATG CAAGGCTCGT GTTGGTATCC AACACAGAGT AACTAAAGAC GAGGCAATGA AATGGTTCCA AGTGAAATAC GAAGGAGTCA TTCTCAACAA GTCCCAGAAC ATCACTGGCT AAAAAAGTCC TCGAAACTCT TCCTTCTATT TTAGAAAACA CTTGTCTCAG TTTTGTTTAC 
Length660
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19865808.. 19867118
Download Sequence
A.thaliana
AGI-codeAT2G42740.1
Descriptionribosomal protein large subunit 16A
TAIR curator summaryencodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.
Alias[RPL16A][ribosomal protein large subunit 16A]
Gene coexpression
MR
MR Locus Description
36.9459 Ahg328280
55.0727 Ahg948739
78.8416 Ahg944044 Rhamnogalacturonate lyase family protein
95.687 Ahg337363
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression