Detail



ID : Ahg944044

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944044|scaffold_700273.1
Sequence
TTTGTCTGAG GTTTAGTAAA ATGGACAAGG AATTGGAAAA CGGATCTCCG GGAGTGAAGG TGGGTCGGGT CATGACTCAG GTTTTCGTTC TGATTTTCCT TCTTCAAGGT GTTCGTTCCA CAACGTCACT AAACAATTTA AACGTCACAA AACCGGGACA AAAACAATCT CCCCCGGTTA CGCTTAGGAA AGTTGGTCAT AACCAAGTGG TCGTTGATAA CGGTATCATC CAAGTTAGCT TCTCGAGTCC AGCAGGCTTA ATAACTGGAA TCAAGTACAA TGGCTTTAAC AATGTGTTGA ACGACCAAAT TGAGAATCGC GGTTTAGTAG GAGAAAAATT CAATATTGTA AATCAAACAA GTGAGCATGT CGAAATTTCT TTTTCGAGAA CATGGAATAT CTCTCAACAT ACCTCGGGAG CCCCATTAAA CGTAGACAAA AGATATATCA TTCGAAGTGG TGTGTCCGGA GTCTACATGT ACGCTGTGTT AGAGAGATTA AAAGGTTGGC CCGACGTGAA CATGGACCAA ACCAGAATCG TCTTCAAGCT TAACACAACA AAATTCGATT ACATGGCTAT ATCTGATGGT CGGCAGAAAA TTATGCCTTC TGCAACAGAT CGAGATATCA AAACTGGTCG TGCTAGTCCA TTGGCTTACA AAGAAGCTGT TCATTTGATA AATCCCCAAA ATCATATACT TAAAGGGCAG GTAGACGATA AGTACATGTA CTCGATGGAA AACAAAGACA ACAAAGTACA CGGTTGGATA TCGGCGGACC AACGTGTTGG GTTTTGGATG ATTACTCCCA GCGATGAGTT TCGTTCATGT GGGCCCATCA AACAAGATCT CACTTCTCAT GTGGGACCCA CCATTCTTTC AATGTTTACA AGTGTACATT ACGCGGGAGT AGATATTAAC ACAATTTATA AAAGCAAGGA GCCATGGAGG AAGATGTTTG GCCCTGTCTT TGTTTATCTC AATTCTGCCT CTTCTCGTAA TCTTCTCTGG ACCGATGCTA AACGACAGAT GGTTTCCGAG GTCCAAAGTT GGCCTTATGA TTTCGTGAAG TCAGTAGATT ACCCTCTTCA TCACCAAAGA GGAATCGTCA AGGGTCGAAT CTTTGTCATG GAGAGATACA ACAAAAGCGA AACGAACTTA TTTGGGAAAT TTGCTTTTGT GGGATTAGCC TTACCTGGTG AAGCTGGTTC ATGGCAAACC GAAAACAAGG GATATCAATT TTGGACACGA GCAGACAAAG TAGGGATGTT CACAATAGCG AATGTTAGAC CAGGGAAGTA TAGTCTCTAC GCATGGGTTT CTGGGTTTAT CGGTGACTAC AAATATGAGC GTGACATTAC CATCACACCA GGTAGGGTGA TAGACGTAGG ACGCATAGTG TACGAGCCAC CGAGAAATGG TCCGACTCTG TGGGAGATCG GAGAACCAGA CCGAACCGCC GCAGAATTCT ATATCCCAGA TCCGGACCCA ACCCTTTTGA CCAAACTCTA TCTAAATTAC TCAAATCCTC AAGACAGATT TAGACAATAT GGTCTATGGG ATCGTTACAG TGTTTTGTAT CCTCGAAAAG ATCTTATTTT TACTACTAGA GTAAGTGACT TTAAAAAAGA CTGGTTCTAT GCCCATGTCA ACAGGAAAGC TGGAAATGGG ACATATAAAG CAACAACATG GCAAATTAAG TTTAATTTAA AAGCAGTGAT TCAAACTAGA ATCTACACAC TTCGAATAGC TTTGGCTGCA GCCACAACTA CTGATCTAGT GGTTTGGGTC AACCAAGCTA ATTCCAAACC CCTATTCATA ACTGGGCTAA TAGGTCGGGA TAACGCGATC GCCAGGCATG GGATTCATGG GTTGTACAAA TTGTACAATA TCGATGTTCA TGGAAAGTTA CTTAGGGTTG GTAATAATAC TATTTTTCTT ACTCATGGTC GGAACTCTGA TTCTTTTTCA GGTGTAATGT ATGATTATCT TCGTTTGGAA GGTCCTTCCG GTGTTTGATA AACTAAATAT GTATAAAT 
Length2038
Protein Sequence
Protein Residue
Map Locationscaffold_7: 933627.. 938540
Download Sequence
A.thaliana
AGI-codeAT4G37950.1
DescriptionRhamnogalacturonate lyase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
26.6458 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
44.2041 Ahg932542 RNI-like superfamily protein
48.8672 Ahg319606 U-box domain-containing protein kinase family protein
52.9906 Ahg906672
54.037 Ahg916405
57.9655 Ahg471684 Polyketide cyclase/dehydrase and lipid transport superfamily protein
69.7997 Ahg916018 beta-galactosidase 14
72.0417 Ahg356074 expansin A24
74.081 Ahg316947 Pectin lyase-like superfamily protein
78.8416 Ahg483371 ribosomal protein large subunit 16A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression