Detail



ID : Ahg483407

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483407|fgenesh2_kg.4__2467__AT2G43050.1
Sequence
TAATCATTAA GTTTCATAAC TATTATGGCT TCATCATCAT CAATATCAAA TCACAAGATT CCAAAAACAC TAATGTTTTT GCTGATCTTA AACTTTTTAT ACCTAATCCA ACCTACTTCA GCTGTGAGTA CCAGTTCCAA TTCCAACTCC CACTTCTCAA GATTCTCGAG ACATCGAAGC TCACCATCAT CAAAACCCAA ACAAGGGTTT CTTGCATCGG TCCAAGAGAG TATGAACCAT GCTCTCTTAG CTCGTTCTCT CGCTTTCAAT CTCACTCTTT CTCACCGAAC CGTACAAACA CACACATTCG ATCCCGTCCA CGACTGCCTC GAGCTACTCG ACGACACACT TGACATGTTA TCTCGCATAC ATGCGGATAA TGACGAAGAA GATGTCCATA CATGGCTAAG CGCAGCACTC ACGAACCAAG ATACTTGTGA GCAGAGCCTT CAAGAAAAAT CCAAGTCATA CAAACACGGA CTTGCGATGG ATTTCGTCGC AAGAAACCTC ACCGGATTGT TGACTAACTC GCTTGACTTG TTCGTATCCG TGAAGTCAAA ACACCGGAAA CTCTTATCGG AACAAAAATA TTTTCCGACG TTCGTTCCTT CGTCGGAGCA GCGGAGGCTT CTAGAAGCTC CCGTGGAGGA GCTGAAGGTT GATGTGGTGG TGGCTGCCGA CGGAAGTGGG ACACACAAAA CCATAGGAGA AGCCTTGTTG TCTACGTCAT TAGCGAGTAG TGGGGGCAGG ACCACAATAT ACCTAAAAGC CGGGACCTAT CATGAGAACA TCAACATTCC GACGAAGCAG AAGAACGTTA TGTTAGTTGG TGACGGGAAG GGTAAAACGG TCATTGTAGG TAGCCGAAGT AATAGAGGCG GCTGGACTAC TTACAAAACT GCCACCGTCG CCGCGATGGG AGAGGGGTTC ATAGCACGGG ACATGACATT CGTGAACAAC GCCGGACCCA AATCGGAGCA AGCGGTGGCG CTCCGTGTCG GAGCAGATAA ATCCGTTGTG CATCGATGCT CAGTGGAAGG ATATCAAGAT TCACTCTACA CACACTCCAA ACGACAATTC TATCGAGAGA CAGATATCAC CGGCACCGTC GATTTCATCT TCGGAAACTC CGCCGTCGTA TTTCAATCTT GCAACATCGC CGCTCGTAAA CCTTTACCGG GTCAGAGAAA CTTCGTGACG GCGCAAGGAC GGAGCAATCC GGGTCAAAAC ACCGGAATCT CGATTCAAAA CTGTAGAATC ACGGCGGAAT CGATGACTTA TCTTGGTCGG CCGTGGAAGG AGTATTCGAG GACGGTGGTG ATGCAATCTT TTCTCGGCGG GTCTATTCAT CCGTCGGGTT GGTCTCCTTG GTCGGGTGGT TTCGGTCTCA AATCTCTGTT TTACGGAGAA TTTGAGAATT CGGGTCCTGG ATCATCGGTT TCGGGTCGGG TTAAATGGAG TGGGTATCAT TCTTCTTTGA CGGTGACGGA AGCGGAAAAA TTCACTGTGG CGGTTTTTAT TGACGGGAAT ATGTGGTTGC CGTCAACGGG CGTTAGTTTC GACTCTGGAC TTGTGAAATG AGCTTTGTAA TTAAGCTCGT TTGATAAATA AATTATTATA TAGTCATTTA TCTTGTGATT AAAGTAACTT TTCTTATTTT ATTATTTGTA TATTTGGGTG TAACCAGGGA AAAAAAAAAA 
Length1700
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20012325.. 20014160
Download Sequence
A.thaliana
AGI-codeAT2G43050.1
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily
TAIR curator summary
Alias[ATPMEPCRD]
Gene coexpression
MR
MR Locus Description
21.587 Ahg359114 transposable element gene
37.7624 Ahg351608 Protein of Unknown Function (DUF239)
42.8836 Ahg942130 Leucine-rich repeat (LRR) family protein
43.6348 Ahg485653 purple acid phosphatase 21
63.1664 Ahg917658 subtilase 4.13
63.7809 Ahg942510 transposable element gene
67.5056 Ahg931324
70.1498 Ahg318152 cytochrome P450, family 90, subfamily D, polypeptide 1
70.993 Ahg484914 transposable element gene
72.3118 Ahg933779 Domain of unknown function (DUF313)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression