Detail



ID : Ahg483619

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483619|fgenesh2_kg.4__2679__AT2G44910.1
Sequence
ATGGGTGAAA GAGATGATGG GTTGGGTCTG AGTCTAAGCT TGGGAAATAG TCAACAAAAA GAACCATCTC TGAGGTTGAA TCTTATGCCG TTGACAACTT CTTCTTCTTC TTCGTTTCAA CACATGCACA ATCAGAATAA TAATAGCCAT CCCCAGAAGA TTCATCACAA CTCTTGGACT CATCTGTTTC AATCTTCTGG AATTAAACGT ACAACTGCAG AGAGAAACTC TGACGCCGGG TCTTTTCTAA GAGGTTTCAA CGTGAGCAGA GCTCCGTCTG CGGTGGCGGT GGTGGACTTG GAAGAAGAAG CCGCCGTCGT CTCGTCTCCG AACAGCACCG TCTCGAGTCT GAGTGGGAAT AAGAGGGATC TTGCGGTGGC AAGAGGAGGA GATGAAAACG AGGCGGAGAG AGCTTCTTGC TCACGTGGAG GGGGAAGCGG TGGAAGTGAC GATGAAGACG GCGGAAACGG CGACGGATCA AGGAAGAAAC TCCGGTTATC GAAGGAACAA GCTCTTGTTC TCGAGGAGAC TTTTAAAGAA CATAGCACTC TTAATCCGAA GCAAAAGCTG GCTCTAGCAA AACAGTTGAA TCTAAGGGCA AGACAAGTGG AAGTGTGGTT TCAGAACCGA AGGGCAAGGA CGAAGCTGAA ACAAACGGAG GTTGATTGTG AGTATTTGAA GAGATGTTGC GATAGTCTGA CGGAGGAGAA TCGACGGTTG CAGAAAGAAG TGTCGGAGCT GAGAGCGTTG AAGTTGTCTC CACATCTCTA CATGCATATG ACTCCTCCTA CTACTCTCAC CATGTGCCCT TCTTGCGAAC GTGTCTCCTC CTCTGCCGCC ACTGTGACGG CTGCTCCTCC TACTACTCCT ACGGTGGTGG GGCGGCCAAG TCCACAGCGA TTAACTCCGT GGACTAGTAT TTCTCTCCAG CAAAAATCAG GTCGCTAG 
Length948
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20764224.. 20765900
Download Sequence
A.thaliana
AGI-codeAT2G44910.1
Descriptionhomeobox-leucine zipper protein 4
TAIR curator summaryEncodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome.
Alias[ATHB-4][ATHB4][HB4][ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4][homeobox-leucine zipper protein 4]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg926904 homeobox protein 33
10.6301 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
17.2916 Ahg916961 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
19.2094 Ahg482616 growth-regulating factor 3
20.347 Ahg481147 growth-regulating factor 1
24.4949 Ahg494701 Leucine-rich repeat protein kinase family protein
26.2679 Ahg494222 Pectin lyase-like superfamily protein
27.4955 Ahg477690 Li-tolerant lipase 1
27.7128 Ahg478836 epithiospecifier modifier 1
30.1993 Ahg474670
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression