| Annotation |
|---|
| Description | jgi|Araly1|483956|fgenesh2_kg.4__3016__AT2G47750.1 |
| Sequence |
GAGCTTGCAT AATTGATGAT ATCAGCACTG ATCTTTTTTT TTTCCCTTTA ACTGATATGT TGCAAGGACA AAGTTAATAT CCATTTCTGG GTATGTAAAT ATGGCTAAAC CCACTATAAA ATACACCTCC TTCCTTTGAG TCCTGAGGCA TTCATTACCT CTCCTCCTCT TCTTCTTCTT CTTCTTCTTC TTTTTATTCA GCTAAAAAAT GGATGTAATG AAGCTTGATT ACAACTACAA AGGTGGCAAT GCATTAACAG AGCTCGAGAG GATCACCTCG AAAGCTGCTG AAGTTCAAGA TAACATTTTA TGTGGGATCT TAGAAAGAAA CAAGGACACA GAGTACTTGA GTAAGTACAT GAAAGGCTCT AAAGACGTTG TGGAGTTTAA ACGATCTGTG CCAATCATCA CATACAAAGA TATCTATCCG TACATTCAGA GAATTGCTAA TGGAGAAGAC TCTTCTCTCA TTACTGGCCA TCCTATTACT GAAATATTAT GCAGCTCTGG GACTTCTGCT GGAGAGCCAA AGCTAATGCC AACCATTTCT GAAGATCTTG ATCGCCGAAC TTTTCTCTAC AATCTTATCA TTCCAATCGT GAACAAGTAC ATACCAGGAC TTGACAAAGG CAAAGCAATG TACCTGAATT TCGTAAAGGC TGAAACATCA ACTCCTTGTG GTCTACCAAT CAGAGCTGTC CTCACTAGTT ACTATAAGAG CAAGCATTTC CAGTGCAGAC CTTATGATCC ATTCAACGAC TTAACCAGTC CTATCCAAAC CATCCTTTGT GAAGACAGCA ACCAAAGCAT GTACTGTCAG TTACTAGCCG GTCTGATTCA CCGCCACAAA GTGATGCGTT TAGGAGCTGT CTTTGCTTCG GCGTTTCTCC GTGCAATCTC TTACCTCGAG AAGAAATGGA GTCAGCTCTG TGAAGACATC CGCACCGGTC GTCTCAACCC CATGATCACC GATCCAGGGT GCCAAATCGC AATGTCTTGT CTTCTAACGT CGCCCGATCC AGAGTTAGCT AGCGAGCTCG AAAAGATTTG TAGTCGGTCG TCGTGGAAAG GGATTCTGTG TCATCTCTGG CCTAAAGCAA AGTTCATCGA AGCAGTAGTG ACGGGCTCAA TGGCTCAATA CATACCAGCA CTTGAGTTCT TTAGCCAAGG GAAGATTCCA TTGGTTTGTC CAATGTATGC CTCCTCTGAG ACTTACTTTG GAGTCAACGT GGAGCCACTC TCCAAACCAT CCGACGTCGT TTTCACTCTT TTGCCTAACA TGTGCTACTT CGAGTTTATC CCTCTCGGCA AAAATGGGAC ACTCTCTTTT GATCTAGACG ATGATGAACA AGTCCCGTGT GATAAAGTCG TTGATTTGGT CAATGTCAAA CTCGGTCGCT ACTATGAACT GGTCGTCACA ACTTTCGCAG GATTGTACCG ATACCGAATC GGCGACGTTC TTCAAGTGGC GGGTTTCTAC AACGAAGCAC CACAGTTCCG GTTCATCTGC CGGAGAAACG TAGTTCTAAG CATCGACTTA GACAAAACCA ACGAAGAAGA TCTGCACAGG AGCATAACGT TAGCCAAGAA GAAGCTTGGA AGCAACGCAT TCCTGGCGGA GTACACGAGC TACGCGGACA CGTCATCAGT GCCAGGCCAC TACGTGCTAT TCTGGGAGAT CCAAGGTCAT CTGGAGCCGA AGCTGATGGA AGGGTGTTGC GTTGCGGTCG AGGAAGAGCT GGATTACATA TACAGACAAT GCAGGACGAA AGAGAGATCG ATAGGGGCGT TAGAGATCAG AGTGGTGAAA CCAGGAACGT TCGAGAAACT GATGGATCTG ATTATAAGCC AGGGAGGGTC GTTTAATCAG TATAAAACGC CCAGATGTGT TAAGTCCAAC AGTGCAACGT TCAAGCTCTT GAACGGACAC GTAACGGCTT CTTTCTTTAG CCCTCGTGAC CCGACTTGGG TCCCGTGATC CTCAAGACTT TTATAATAAC CATCCGATCG GATTCGC |
| Length | 2017 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21970441.. 21973367 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G47750.1 |
| Description | putative indole-3-acetic acid-amido synthetase GH3.9 |
| TAIR curator summary | Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology. |
| Alias | [GH3.9][putative indole-3-acetic acid-amido synthetase GH3.9] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.225 |
Ahg494871 | F-box family protein |
| 14.7986 |
Ahg493181 | Protein kinase superfamily protein |
| 26.4575 |
Ahg899602 | |
| 33.4664 |
Ahg929588 | phragmoplast orienting kinesin 1 |
| 37.6962 |
Ahg948807 | Helicase protein with RING/U-box domain |
| 44.8107 |
Ahg490375 | Minichromosome maintenance (MCM2/3/5) family protein |
| 46.6476 |
Ahg950749 | CCT motif family protein |
| 51.9615 |
Ahg916961 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 52.3068 |
Ahg479245 | Leucine-rich repeat (LRR) family protein |
| 58.5833 |
Ahg919381 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|