| Annotation |
|---|
| Description | jgi|Araly1|948807|scaffold_800694.1 |
| Sequence |
CATTCTCGAT TTCTTCCCGA ATGGCCATCG TTGATGACTC TGAGAAGCTG ATAACTGAAT CCGAAGCTGT TTCGAGTTCC GTTGATGGTA AGATCGTTGC AGATACTCCC GACTTTATTG ACGAATCCTC TCTAGTCGTC AGAACAACCA CTGGAGTCCG AATCTCACCT CATTTCGTAG AGCAAAGCCT TGTTGACTCC GATGGATCTA AGTCGGATTT TTCGGGCGTT GTTGCCCCTG CGGTTACGCT TCCGGCGAAA GACGAGGTAA TTAGTGATGG TTTTGCTTCT GTGAATAAAG AGATTGTAGA ATCTGATTCA TTTAGGGCGG ATAGTTTAGA GACTCGTGTT AAGGAGGAAC CTGATTTGGA TGTTGAGAAT CGCGAAGAAG CGATGATTAT TGATTCGATA GGAAATTCTG TGGTTGAAAC TCTTCCAAGT GCTTCGGGTG ATGATTGTAA TGTTCAGGTA GAGGTAGTGG AACCTGAATT GCTTGTTGAG AATCTGGTGG TTGTTAAAGA AGACGAAGTG TTCGTTGATT CGATAGCGAA ATCTGTTGTT GATAAAGAAG AAGAGATGAT AGTTGATTCT ATAGAAAATT CTGTGGTTGA AATTGTTTCA AGTGCTTCAG GTTGTGATTG TAATGTGAAG GTAGTGGTAG TGGAACCTGA ATTGTGTGTT GAGACTCTGG TGAGTGTTAA AGAAGAAGAC ATGAGTGTTG ATTCTATAAT GGAATCTGTG GTTGAAACGG TTTCCAGAGG TTCAGACAAC AAGTGTGTTG ATGTCAAGGT CAAGGAAGAA CCTGATTTAG ATATAAAGTT AGAAGAAGAT TCTGTTGTGC TCGAGAAGAA GGATGAGGTA ATCAAAGTCC AGGAAGACCA GCCAAGTGAG ATTAATGGAT TGTTGCAAGA AAATAAGAAA GTAGACCAAG AAATTGTTCT CTTTTCGTCT GGTGATTCGG ATGGTGCATC AGCTAAAAGA AGGAAAATAG AGATGGAATC ATCTGTACCA ATCGGTGTCC AAAGCTGTAT CCTAGCGCCG ACGCCCCTTC GAGTTGTGAA ACCGGAGAAG TTGGATACCC CTGAAGTTAT TGATCTGGAA TCTGAGAAGA GTTATACTCA TGTGAAGATG GAACCGGTTG AGGAAATAAA GGCGGAAGCT GTGAAGATGA GTTCTCAAGT GAAAGAATTG AAATTTAGCC GTGAGCAGAA ACCGGTATTT GTGAAGAAGG AACCGGTTGA AGCAAGAAAG GTGAAAGTGG AAGACGGAGA TTTTCCGGTG GAGAAAGATT GGTATTTGGT TGGGAGGTCA CTTGTCACTG CTACTTCTAC AAGTAAAGGA AGGAAGTTAG AAGATAACGA GATTGTGAAT TTCACTTTTT CCTCTGTTGC CAATTGGAAA GTCCCTAACA TTGTTCGTTT CTCTACCAAA AGATGTGGCG AGATTGGTAG ACTTCCTATG GAGTGGTCTA ATTGGGCTGT GAGTCTTTTA AGATCTGGTA AGGTCAAAAT GTTAGGCAGA TGTGTAGCGG CGCCACCGTT TCTTACAATG ATGCAAGAAA TTATGCTATA TGTCAGTTTT TACATTCACA TCTCGATATT CACTGATGTT AGCAAATCCA CTTGGCGAAT TGGTTCTTCC CCAAACATCG AGTCCACGCT TCATCCTCTT CTCCAGCTTT TCAAACACTT GACAATCAAA CCTTATCAAA AGGCGGAGTT TACTCCTGAG GAACTTAACT CTCGTAAACG ATCACTGAAT TTGGAGGATG ACTTTGATGA AAGAGCAGCA TTGTTGGCCA TAGCAAAAAG AAGAAAAGGT TGTCAACAGT CTCTGGAGCA GAACAAAGAT GAAGAAGAGG CTCCTGACTC ATATATGAAT CGGGTTGTCG GCGCTGCAGA TTCATATAAC CTTGAGGAAA TGGAAGCTCC AAGTACACTA ACGTGTAACC TGAGACCGTA CCAGAAACAA GCTCTCTACT GGATGTCAGA ATCTGAGAAA GGAATTGATG TTGAAAAGGC AGCTGAAACT CTACATCCAT GTTGGGAGGC TTATCGAATC TGTGACGAGA GAGCACCTTC AATTTATTTG AACATCTTTA GTGGTGAAGC AACAATCCAG TTTCCAACAG CAACACAGAT GGCAAGAGGC GGAATATTGG CAGATGCCAT GGGACTTGGA AAAACTGTGA TGACAATTGC ACTAATACTT GCACGGCCTG GCCGAGGTAA CCCAGGAAAT GAAGATGGCT TGGCGGCAGA TGTTAATGCA GATAAACGCA AGAGGAAGGA GAGTCATACC GCACTAACGA TTGTGAAGGC AAAAGGAGGC ACTCTTATTA TTTGTCCCAT GGCATTGTTA AGCCAATGGA AGGACGAGCT TGAGACTCAT TCAAAGCCTG ACACTGTGTC TGTGTTAGTT TACTATGGAG GGGATAGGAC ACATGACGCG AAAGCAATAG CGAGTCATGA TGTGGTTTTG ACAACTTATG GTGTCTTAAC CTCAGCTTAC AAGCAGGATA TGGCAAACAG TATTTTCCAC AGGATTGATT GGTATAGGAT TGTTCTTGAT GAAGCTCACA CGATCAAATC GTGGAAAACT CAAGCTGCTA AAGCTACATT TGAGTTGTCC TCACATTGCA GATGGTGTCT GACTGGGACT CCCTTACAAA ACAAGCTTGA AGATCTTTAC AGTCTTCTAT GCTTCCTGCA TGTCGAACCA TGGTGCAATT GGGCTTGGTG GAGTAAGTTG ATACAGAAGC CTTATGAAAA TGGTGATTCA CGAGGACTGA AGCTGATCAA GGCGATTTTG AGGCCATTGA TGCTGAGAAG AACAAAGGAA ACAAGGGACA AAGAAGGAAG TCTAATTCTT GAACTTCCTC CAACTGATAT CCAAGTCATT GAATGTGAAC AATCCGAAGC AGAACGTGAC TTCTATACTG CCCTTTTCAA GAGATCCAAA GTTCAATTTG ACCAGTTTGT GGCACAAGGA AAAGTTCTCC ACAACTATGC AAACATCCTC GAGCTCCTCC TCCGTCTACG CCAATGTTGT AACCACCCTT TTCTAGTTAT GAGCCGAGCA GATTCACAAC AGTACGCAGA CTTAGATAGC CTTGCAAGGA GGTTTCTTGA TAACAACCCT GACTCTGTTT CCCAAAATGC GCCTTCTCGG GCATATATCG AGGAAGTTAT CCAGGATTTA CGCGATGGAA ATAGCAAAGA ATGTCCAATA TGTCTGGAGT CTGCAGATGA TCCCATTCTC ACACCTTGTG CTCACAGAAT GTGCCGGGAA TGTCTCCTTA CTAGCTGGCG GTCCCCATCT TGTGGTCTTT GCCCAATCTG CAGGACAATC CTGAAGAGAA CTGAGCTGAT CTCATGCCCG ACAGATAGTA TATTCCGTGT TGATGTGGTA AAGAACTGGA AGGAGTCTTC AAAGGTTTCA GAGCTGCTCA AGTGCTTAGA GAAGATCCAA AAATCTGGTT CAGGTGAGAA GAGCATTGTC TTTAGCCAGT GGACTTCATT TTTGGATCTT TTGGAGATTC CATTGCGAAG AAGAGGATTC GAGTTTCTTA GATTCGATGG GAAGCTGGCT CAAAAAGGAA GAGAAAAGGT TTTGAAAGAG TTCAATGAAA CCAAACAGAA AACGATTCTG CTTATGTCTC TGAAAGCTGG AGGAGTTGGT CTGAATCTAA CTGCAGCTTC AAGTGTCTTC TTAATGGATC CATGGTGGAA TCCGGCGGTA GAAGAGCAAG CGATCATGAG AATTCATCGA ATAGGGCAGA AACGAACAGT ATTTGTCAGA AGATTCATTG TCAAGGATAC AGTGGAGGAA CGGATGCAGC AAGTTCAGGC AAGGAAGCAG AGGATGATTG CCGGAGCTTT GACCGATGAA GAAGTCCGGT CGGCAAGACT TGAGGAGCTC AAAATGTTGT TCCGATAAAA GACTTGGAGA AAGTCTTAT |
| Length | 3959 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 3907013.. 3912538 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G43530.1 |
| Description | Helicase protein with RING/U-box domain |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg493296 | binding |
| 9.48683 |
Ahg487806 | Putative endonuclease or glycosyl hydrolase |
| 10.4881 |
Ahg496925 | chromatin remodeling 1 |
| 11.9164 |
Ahg941166 | origin recognition complex subunit 3 |
| 13.4164 |
Ahg335111 | ATP binding microtubule motor family protein |
| 14.8997 |
Ahg935641 | Dof-type zinc finger DNA-binding family protein |
| 15.8114 |
Ahg925614 | chromatin assembly factor-1 (FASCIATA1) (FAS1) |
| 17.2047 |
Ahg331330 | methyltransferase 1 |
| 17.8885 |
Ahg908084 | Zinc finger (C3HC4-type RING finger) family protein |
| 18.9737 |
Ahg489527 | Galactose oxidase/kelch repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|