| Annotation |
|---|
| Description | jgi|Araly1|484543|fgenesh2_kg.5__535__AT3G27530.1 |
| Sequence |
ATCGAACGGT TTATCAGCTC TTCTGACTTT GCTTGAACAG ATCGGTCAGG TGAATGTGAA GAAGAGATCG CTGCGATCTA TAACGGTTCC ATTGGCTGGA GATTTCATCT TCCTTGTTTT GATCTTGTTC GTATTACATA AGTCTGTGTA AATTTTTCGT GGCTAAAGAG ATATGGATTT GGCATCCCGT TATAAGGGGG TTGTTGGAAT GGTTTTTGGC GACAATCAGT CTTCGAATGA AGACAGTTAC ATTCAACGCC TGCTGGACCG TATAAGTAAT GGTACCTTGC CTGACGATAG GAGAACTGCT ATAGTAGAAC TTCAGTCTGT TGTAGCAGAA AGTAATGCTG CTCAATTAGC TTTTGGAGCA GCCGGATTTC CTGTGATAAT GGGCATCCTA AAGGACCAGC GGGATGATGT TGAAATGGTT CGAGGTGCTT TAGAAACTCT TCTTGGCGCT CTAACGCCAA TCGATCATGC AAGGGTACAG AAGACTGAAG TCCATGCAGC TCTTATGAAC TCCGACTTGC TCTCCCGTGA AGCTGAAAAT ATCACTCTTC TTTTAAGTTT GCTGGAGGAA GAAGACTTTT ATGTTCGATA TTACACTCTT CAGATTTTGA CAGCTCTGCT TATGAATTCT CAAAACAGGT TGCAGGAAGC TATTTTGACA ACTCCTCGCG GCATAACTCG ACTCATGGAC ATGCTAATGG ATAGAGAGGT AATCCGGAAC GAGGCTTTGT TGCTTCTTAC GCACTTGACT CGTGAAGCAG AGGAGATCCA AAAAATCGTT GTCTTTGAAG GTGCATTTGA AAAGATTTTT AGCATCATTA AGGAAGAAGG GGGGTCAGAT GGCGATGTGG TTGTGCAGGA CTGTCTGGAG TTGTTGAACA ATCTTCTTCG CAGCAGTTCA TCAAACCAGA TACTACTAAG GGAGACCATG GGTTTTGAAC CGATCATTTC AATTCTAAAA CTGCGAGGGA TTACATATAA GTTCACCAAG CAAAAGACTG TTAATCTACT TAGTGCACTG GAGACAATTA ATATGCTGAT CATGGGAGGT GCAGACACGG AGCCTGGAAA AGATTCAAAC AAGCTGGCAA ATAGAACAGT TTTAGTTCAG AAAAAACTGC TAGACCACCT TCTGATGTTA GGTGTTGAAA GCCAATGGGC GCCTGTTGCT GTTCGCTGCA TGACATTTAA ATGCATTGGA GATCTAATTG ATGGACACCC CAAGAACCGT GATATCCTTG CTAGCAAAGT TCTTGGTGAA GATCGGCAAG TAGAACCTGC ACTCAATTCT ATCCTCAGGA TCATTTTACA GACGTCCAAT ATTCAAGAGT TTGTTGCAGC TGATTACGTT TTCAAGACGT TCTGTGAGAA AAATCCCGAG GGTCAAACAA TGCTAGCTTC GACTTTAATA CCTCAACCAC ATCCCACAGC CCGAGATCCT CTAGAAGATG ATGTTCACAT GTCATTTGGA AGTATGTTGT TACGAGGCCT TTGTTCTGGT GAAGCTGATG GTGATCTTGA GACATGTTGC AGAGCTGCAA GCATTCTTTT TCATGTTGTG AAGGACAACC TTAAGTGCAA GGAAAAGGCT TTGAAAATCG TACTTGAATC ACCTATGCCT TCCATGGGAA CTCCAGAGCC TCTCTTTCAG AGGATTGTCA GATACCTGGC TGTTGCTTCT TCCATGAAAA GCAAAGATAA ATCAAGCACA CTGGGGAAAT CATATATTCA ACAGATCATT CTAAAACTGC TTGTGACATG GACTGTTGAT TGTCCGGCTG CAGTTCAGTA CTTTTTAGAT TCTCGCCACC ACCTAACGTT TTTGCTCGAG CTGGTAACAG ACCCAGCTGC AACAGTTTGC ATAAGGGGAT TGGCGTCTAT TCTATTGGGA GAATGCGTCA TTTACAATAA ATCAATTGAG AATGGTAAAG ATGTTTTTGC TGTAGTTGAT GCTGTGGGCC AGAAGATGGG GCTTACATCA TACTTCTCGA ATTTTGAAGA GATGCAGAAC AGCTTCATCT TCTCTACCTC CAAGAAACCT CAACAGGGTT ATAAACCGTT GACAAGAACA GCCATGCCTA GTGAAGCCGA GATTAATGAG GCGGATGGGG CAGATGAGAT GGTTAGAGGG AATGAGGATC ACCCAATGCT CTTGTCTTTG TTTGATGCTA GTTTCATAGG CTTAGTGAAG AGCCTGGAAG GCAACATCAG AGAGAGAATA GTGGAGGTGT ATAGTCGGCC AAAAAGTGAG GTGGCTGTAG TACCAGCAGA TTTGGAGCAG AAGAGCGGAG AAACCGAGAA AGACTACATC AACCGCTTGA AAGCCTTTAT AGAGAAACAG TGCTCGGAAA TTCAGAACCT CCTAGCTCGT AACGCTGCTT TGGCAGAAGA TGTAGCTAGC TCTGGCAGGA ATGAGCAATC TCAAGGATCA GAGCAAAGAG CAAGTACAGT AATGGACAAG GTTCAGATGG AAAGCATCAG GCGAGAACTT CAGGAGACAT CTCAGCGTTT AGAGACGGTT AAAGCTGAAA AAGTGAAGAT CGAATCCGAG GCATCAAGTT ACAAGAACAT GGCTGCGAAA CTTGAGTCGG ATCTAAAAAG CCTATCGGAT GCATACAACA GTCTCGAACA AGCGAATTAC CACCTTGAGC AGGAAGTGAA ATCCTTGAAA GGAGGAGAAG GTCCCATGGA GGTTCCTGAT ATAGAAGCCA TTAAGGAAGA AGTGAGAAAA GAAGCTCAGA AAGAGAGCGA AGATGAATTA AACGACTTGT TAGTATGTTT GGGACAAGAG GAGAGCAAGG TCGAAAAACT AAGCGCGAAG CTGATAGAAT TAGGAGTTGA TGTTGATAAG CTTTTAGAGG ATATTGGGGA CGAATCAGAA GCTCAAGCGG AATCTGAAGA AGACTGACCA TTGAACAAGT AGTAGAGATT TAATGTCCTC TAAAATGCTC TCTTCATCAG GTAATGGAAC TTGTACAGTC CTGGGTGGTT TACTTTGATG TTTGACAATT CTCGTTGCTT AATCTTTTAG TTATAACTCT TTAAATTATC TACCAACTTC TTAGAGTGCT CGAAACAT |
| Length | 3088 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 3647102.. 3653611 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G27530.1 |
| Description | golgin candidate 6 |
| TAIR curator summary | This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein. |
| Alias | [GC6][MAG4][golgin candidate 6][MAIGO 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg927169 | Ribonuclease II/R family protein |
| 4 |
Ahg925182 | RNA helicase family protein |
| 5.83095 |
Ahg311691 | glyoxalase 2-4 |
| 6.9282 |
Ahg488471 | HEAT repeat-containing protein |
| 8.77496 |
Ahg943964 | SAP domain-containing protein |
| 8.83176 |
Ahg474017 | associated molecule with the SH3 domain of STAM 1 |
| 10.247 |
Ahg951429 | nitrogen fixation S (NIFS)-like 1 |
| 12.8452 |
Ahg950166 | co-factor for nitrate, reductase and xanthine dehydrogenase 5 |
| 13.5277 |
Ahg496629 | splicing factor, putative |
| 14.8324 |
Ahg482523 | ARM repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|