Detail



ID : Ahg950166

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950166|scaffold_802053.1
Sequence
TTGGTTCTCT AACATCGTCG TGATGATGTC GAACGGTGGA GATTCGCCGG AAATTGTCCG GGAATTGGAA GAGTTAAAGC TCAAGAAGGC AGAAATAGAG CACCGTATTT CGACCCTCGA AGCTAAGCTC CAGGATACGG CGGCGGTTGA ACGGTACGAC GCCGTATCCA ACGGTGACTC TTATCCAACG GCGCCGGAGC TTGAACATGG GTTATCTCCG GATCAGATTT ACCGTTATAG TCGTCAATTG TTACTCCCTT CGTTTGCTGT TGAAGGGCAG TCAAATCTTT TGAAGTCTTC AGTATTAGTT ATTGGAGCTG GAGGACTGGG TTCACCTGCC TTATTGTATC TTGCAGCATG TGGTGTTGGT CGCTTGGGTA TTATAGATCA TGATGTTGTA GAGCTCAACA ATATGCACAG GCAGATTATA CACACAGAAG CATTTATTGG TCATCCCAAA GTGAAATCTG CTGCTGCTGC TTGTCGCTCA ATAAATTCGA CGATCAAAGT TGATGAATAT GTGGAAGCTC TTCGCACTTC CAATGCTTTG GAAATCCTTA GCCAATATGA TATCATAGTA GATGCGACTG ATAATCCTCC AAGCCGTTAC ATGATCAGCG ATTGTTGTGT CCTGTTAGGA AAGCCTTTGG TTTCGGGTGC TGCACTTGGG ATGGAAGGGC AGCTTACGGT TTATAATCAC AACGGAGGCC CGTGTTACCG GTGTCTTTTT CCCACTCCTC CACCTACCTC AGCATGCCAA AGATGTTCTG ATAGTGGAGT TCTTGGAGTA GTTCCGGGTG TTATTGGTTG TCTACAAGCG CTAGAGACAA TTAAACTCGC GAGCATGGTG GGAGAACCAC TCTCTGAACG GATGCTTCTT TTTGATGCTT TATCAGCAAG GATGCGCATT GTAAAGATCA GAGGCAGGTC ATCACAGTGC ATAGTGTGTG GAGACAATTC ATCTTTCAAT AAGCAAACGT TTAAAGATTT TGACTATGAG GACTTCACCC AATTTCCTTT ATTTGCGGGC CCATTGAACC TGCTTCCTGC AGAATCAAGA ATTAGCAGCA AGGAGTTCAA ACAAATTCTT CAAAAGAAGG AACAGCATAT TCTGCTCGAT GTTCGACCTT CGCATCACTA TAAGATTGTC TCTCTCCCGG ATTCACTTAA CATCCCTCTT GCAAACTTAG AGGCTCGGTT AAACGAGCTT ACTTCAGCTC TTAAAGAAAA GGAAGACGGC CATGTTAACA CCGGATCTTG CACAAATCCT AGTGTCTACG TTGTTTGCAG ACGCGGGAAT GATTCACAGA GAGCTGTTCA ATATCTTTGT GAATCAGGTT TCGATTCAGC CAAGGATATA ATTGGAGGAC TGGAAGCTTG GGCAGCCAAT GTCAACCCCA ACTTCCCCAC CTATTAGAGG GAAACTTTTT GCATCAAGTT 
Length1440
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15894977.. 15897654
Download Sequence
A.thaliana
AGI-codeAT5G55130.1
Descriptionco-factor for nitrate, reductase and xanthine dehydrogenase 5
TAIR curator summaryputative molybdopterin synthase sulphurylase (cnx5)
Alias[CNX5][SIR1]["co-factor for nitrate, reductase and xanthine dehydrogenase 5"][SIRTINOL RESISTANT 1]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg946418 AT hook motif DNA-binding family protein
9.38083 Ahg481833 pumilio 3
11.6619 Ahg950858 histone deacetylase 5
12.8452 Ahg484543 golgin candidate 6
13.2665 Ahg477953 DEAD box RNA helicase family protein
13.4164 Ahg925100 RNA helicase, ATP-dependent, SK12/DOB1 protein
14.1421 Ahg484555 ARM repeat superfamily protein
18.5742 Ahg315930 Protein kinase superfamily protein
23.1084 Ahg478789 heat shock protein 60-3A
27.5681 Ahg910878
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression