Detail



ID : Ahg484620

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484620|fgenesh2_kg.5__612__AT3G28455.1
Sequence
AGGGCCAATC ACGGATTTGT CTTCCAAGGT ATATAAAAAC AACCTAAATG CTTGTTTTTT GCTTCCCATT TCGCTTTCCA CTTTTTTGAG CCTCTTCTGT CCAAAGATCT CTCTCTCTAT TTATGTGACA GTCACTTCAC AAACATCATG GATGTTCTGC TCAGTTTATT CTTGGGTTTG GTTGGTCAGT TGTTTATGTT AAACAGGAAG CTGTAGGGAC ATCGGTTGCA GTATGGGTGG TAATGGCATT AGAGCTTTGG TTGGAGGTGT TGTTTCTTTG GGTTTGATTG TGTTTCTTCT TGTCGGTATC TTAGCAAACT CTGCACCAAG TGTTCCATCA ACAGAACATG TCAAGACTTT GCGGTTTAGT GGTAAGGATG TGAATCTGTT TCATGTGAGC AAGCGAAAAG TTCCAAATGG ACCTGATCCT ATCCACAACA GGAAAGCAGA AACTTCGAGA CGGCCACCAA GAGTATGATA TAACTGTAAT GTTTTATCTC ATGCGGGCTT CGTTCATTTT CGGTTATTTT CCTACCGTTT CGAGACACAG TGAAGTATGC GACCTCTCAA TTACAGTTCC ACGTCAAGAA GCTACTATTT TTTCTGGGGC AATCCATAAC TTCAGATTCA GAGATATGCT ATGAACTCAT AGCTTTGTGA AAGGTCTCTT CTTACTCTGT AGCATTTTGG AAGGTGAAGT CTTTGCTCTC TCTTATATTT TGGAACACTT GTGTCTAAAG ATTGAAAACA TTCAGAAGAT ATTAAAGACT CTTAAGGGCT TTGTAGGGTT TTGTAATAAC ATTTGTA 
Length807
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4355166.. 4356377
Download Sequence
A.thaliana
AGI-codeAT3G28455.1
DescriptionCLAVATA3/ESR-RELATED 25
TAIR curator summaryMember of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo.
Alias[CLE25][CLAVATA3/ESR-RELATED 25]
Gene coexpression
MR
MR Locus Description
29.5973 Ahg932706 Mitochondrial substrate carrier family protein
33.7639 Ahg474562
44.4972 Ahg942719 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
50.6458 Ahg928436 RNI-like superfamily protein
58.2752 Ahg327268 Nucleic acid-binding, OB-fold-like protein
59.0931 Ahg470051 Cox19 family protein (CHCH motif)
62.1128 Ahg479363 Nucleic acid-binding, OB-fold-like protein
68.8477 Ahg492316 RNA polymerase III RPC4
69.0072 Ahg488768 TCP-1/cpn60 chaperonin family protein
77.3628 Ahg902301 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression