Detail



ID : Ahg928436

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928436|scaffold_300893.1
Sequence
CACAGAAGTT GAAGTGAGGC ATGGAAGATG TGTCCGAGTC TGATAATGTT GAGACCTCCA TTATCCACCT TCCAGATGAT TGCCTTTCCT TTATCTTCCA ACGACTTGAT AATGTTGCTG ACCATGATTC ATTTGGTTTG ACTTGTCATC GCTGGCTCAA CATCCAAAAC ATTAGCCGTC GATCTTTACA GTTCCAGTGT TCTTTCACTG TCCTGAACCC TGCTAGTCTG TCTCAGACAA ATCCTGATGT CAATTCCTAT CATCTCCACA GGCTTCTTAC TCGGTTTCAG TGGTTGGAGC ATCTTTCCCT TTCTGGCTGC ACGGTGCTGA ATGATTCGAG TCTCGCCTCG CTCAGCTATC CTGGTGCAAG ACTGCATAGT CTTTACTTAG ATTGTTGCTT TGGGATTTCT GATGATGGGA TCTCCACAAT TGCTAGCTTT TGTCCCAATC TCAGAGTTGT CAGTCTCTAC CGCTGCAACA TCAGTGACAT TGGATTGGAG ACATTGGCCA CGGCTTCCTT GTCTCTAAAA TGCGTGAATC TCTCGTACTG CCCTCTGGTA TCTGATTTAG GGATAAAAGC ATTGTCACAA GCATGCTTGC AGCTTGAGTC AGTGAAAGTC TCAAACTGCA AGAGCATTAC TGGTGTTGGC TTTAATGGCT GTTCTCCAAC TCTAGGCTAT GTGGATGCAG AGTCTTGTCA GCTTGAGCCG AAGGGTATAA CGGGGATCAT TAGCGGAGGT GGGATTGAGT TTCTAAATAT TTCAGGTGGA AGTTGCTACA TCCGCAAAGA TGGGTTGGTA CCTATTGGAT CCGGGATTGC ATCAAAACTT AGAATCTTGA ACCTAAGGAT GTGCAGAACG GTTGGTGATG AATCCATTGA AGCTATAGCA AAAGGTTGTC CATTGCTCCA AGAGTGGAAC TTGGCTCTGT GTCATGAAGT TAAGGTTTCG GGATGGAAAG CCGTAGGAAA GTGGTGCCGT AACTTGAAGA AACTCCATGT GAACCGTTGT AGGAACTTAT GTGACCAAGG GTTGCTTGCT CTACGATGCG GTTGCATGAA CCTCCAGATT CTCTACATGA ACGGGAACGT GAGGCTGACC CCTACAGCAA TTGAGATGTT CAGATTACAT AGAGCCGATA TAACACTAAG GACAGAAGAA ATGATGGTCA TAGGACCAGA CTGGAGACTA TATGCACAAG AATGAAGCAT CAATTTGTAC CCAAC 
Length1225
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2985613.. 2986781
Download Sequence
A.thaliana
AGI-codeAT3G07550.1
DescriptionRNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.4408 Ahg358554
28.0891 Ahg490593
44.1928 Ahg491646 Protein of unknown function (DUF1068)
50.6458 Ahg484620 CLAVATA3/ESR-RELATED 25
66.5582 Ahg484014 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
78 Ahg493198 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
79.196 Ahg930806 Tetratricopeptide repeat (TPR)-like superfamily protein
90.5318 Ahg482349 Calcium-binding EF-hand family protein
96.3846 Ahg480909 Tetraspanin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression