| Annotation |
|---|
| Description | jgi|Araly1|484683|fgenesh2_kg.5__675__AT3G29160.2 |
| Sequence |
GTGGTTTCTT GATTCGTCAT TACCAATTTA CCATGAAGAC TTAAAAACCT GACTCAGCTC TGCGTCACTT ACGAGTTGGA ATCTGACTTC CCAAGAATTT CTTCAGATTA CATCGAAATG GATCATTCTT CGAATAGATT TGGGAATAAT GGAGTGGAAT CGATTTTACC GAATTACAAG CTTGGTAAAA CTCTTGGAAT TGGATCTTTT GGGAAGGTGA AAATAGCAGA GCATGTTGTC ACAGGGCATA AGGTTGCTAT CAAAATCCTC AATCGTCGTA AGATCAAGAA TATGGAAATG GAAGAGAAAG TGAGAAGGGA GATTAAGATT CTACGCTTGT TTATGCATCC TCATATTATT CGGCAATATG AGGTAATAGA GACCCCAAGT GACATTTATG TTGTCATGGA GTATGTAAAG TCCGGAGAGC TCTTTGATTA TATTGTTGAG AAAGGCAGAT TGCAAGAGGA TGAGGCTCGT AACTTTTTCC AGCAGATAAT ATCTGGTGTA GAGTATTGCC ATCGTAATAT GGTTGTCCAT AGAGACCTGA AGCCTGAGAA TTTACTATTG GATTCGAGGT GCAACATTAA GATTGCAGAC TTTGGGCTGA GTAATGTTAT GCGGGATGGT CATTTTCTAA AGACGAGTTG TGGAAGTCCC AACTACGCTG CTCCTGAGGT TATATCAGGT AAATTATATG CTGGACCTGA AGTAGATGTA TGGAGTTGCG GAGTGATATT GTACGCTCTA TTATGTGGTA CTCTTCCATT TGATGATGAA AACATTCCCA ACCTTTTCAA GAAAATAAAG GGTGGGATTT ACACTCTTCC TAGTCATTTA TCATCTGAGG CTAGAGACCT GATCCCAAGG ATGCTTATAG TTGACCCAGT GAAACGGATC ACCATTCCTG AGATCCGTCA ACACCGTTGG TTCCAGACTC ATCTCCCTCG TTATCTTGCT GTTTCTCCAC CAGATACAGT AGAGCAGGCT AAAAAGATCA ATGAGGAGAT AATTCAAGAA GTGGTTAACA TGGGATTTGA CAGAAACCAA GTTTTGGAAT CTCTGCGCAA CAGAATACAA AACGATGCTA CTGTTACATA CTACCTGTTA TTGGATAACC GGTTCCGTGT TCCAAGTGGC TATCTAGAAT CCGAGTTTCA GGAGACAACA GACAGTGGTT CCAATCCTAT GCGCACACCT GAAGCGGGTG CTTCACCTGT AGGCCACTGG GTTCCTGCAC ATGTGGATCA CTACGGGTTG GGAGCAAGAT CACAAGTGCC AGTTGACCGA AAATGGGCTC TTGGACTTCA GTCCCATGCG CATCCTCGTG AAATCATGAA TGAAGTTTTG AAAGCTCTTC AAGAACTCAA TGTGTGTTGG AAGAAGATTG GTCACTACAA CATGAAATGT CGATGGGTTC CTGGTATTGC TGATGGTCAG AATACTATGG TCAACAATCA GCTGCACTTC AGAGATGAAT CCAGCATCAT TGAGGATGAC TGTGCCATGA CTTCACCCAC TGTCATCAAA TTTGAACTTC AGCTATACAA AGCTCGCGAA GAGAAGTACT TGCTAGATAT CCAGAGAGTT AACGGTCCTC AGTTTCTCTT CTTGGATCTA TGCGCCGCCT TTCTTACAGA GCTTCGTGTG ATCTGACGCT TTTAACCATT TTGTTCAAAC ATTTTTTTCT TTCATGTTCA ATGGTTTGTA ATAGTAGAGA ACATAATATA ATATGTGGGT GCAGTGTTTA CTTTGCCGGG TTACTTTTAT ATACCTGGAT TCTAAGTTAA ACTCTACTGT AATAGTAACT ATCATTTCTT CTTTTTTTAG ATGGTCTTTT AAGGTTTGAT CATGTGTACA TAACTTAGTT GTTTC |
| Length | 1875 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 5108679.. 5112378 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G29160.1 |
| Description | SNF1 kinase homolog 11 |
| TAIR curator summary | encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1. |
| Alias | [AKIN11][ATKIN11][KIN11][SNRK1.2][SNF1 kinase homolog 11][SNF1-RELATED PROTEIN KINASE 1.2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 18.9737 |
Ahg481012 | SUMO-activating enzyme 2 |
| 20 |
Ahg481680 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 20.347 |
Ahg951196 | Glycosyl hydrolases family 31 protein |
| 31.1769 |
Ahg494272 | casein kinase II beta chain 1 |
| 37.9868 |
Ahg478006 | multifunctional protein 2 |
| 39.2428 |
Ahg338999 | Protein kinase superfamily protein |
| 40.1248 |
Ahg909682 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 41.9524 |
Ahg941061 | Protein kinase superfamily protein |
| 50.4083 |
Ahg939686 | Phosphatidic acid phosphatase (PAP2) family protein |
| 52.2494 |
Ahg474468 | Plant protein of unknown function (DUF641) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|