Detail



ID : Ahg474468

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474468|fgenesh2_kg.1__4422__AT1G53380.1
Sequence
GTTTCTCATC TCCAGCTCTC ATTTTCTCTC TCATCTTCAA CCTCTTAACT CTCTTCTCTC TACTCTTTCT TTGGACGAAT CTGTAAACAT TGAAAGGAAG GTAAAGAAAC AGAGAGATCT AACTTAGTCT GCAGGGTTTA AGCAGAGGTT GGTTTATCAA TTTCTTTCTT CAGATTTACT CTACAATGAA GTGAGAATTT CAAAAAATTA ACAAAGAAAA AACTTGGGAC TTTAGCAAGA TGGAGACTGT GAGACCAATG GTTGTTGCTC CTAAGGGTAA ACTCAGACGC AAGTTTGCGA AAGTTCTTAA CATTCATAAG CTAACGGGTG TTGCTCCAGA AGGGGAAATG AAGAAGATAA AGTTCGATTC CAAAACCGCT AAGCTGTCTG AGTCTTTCTA CAAGCTTGAG GAAGAGTACG AGAGAAGTCT GGCATTGGAA GCTCTTCTTG CGAAGCTTTT TGCTACGGTT TCTTCCATCA AAGCGGCTTA TGCGCAGTTA CAGCATTCTC AGTCTCCGTA TGACTCGATC GGGATTCAAA AAGCAGACAA CTTGGTAGTC GCCGAGCTTA AGACTTTGTC TGAGATTAAA CAATGTTTCT TGAAGAAACA GGTGGATCCA AATCCCGAAA GGACTTTGGT ACTCGCGGAG ATTCAAGAGC TGAGGAGTCT ATTGAAAACG TATGAGATAA TGGGGAAGAA GCTTGAGTCT CAGTATAAGC TTAAAGACTC GGAGATTATA TTTCTAAGAG AGAAACTCGA TGAATCGATG AAACAGAACA AGTTGACAGA GAAGAGACTT AACGAAAGCG GACAACTTTG CAATCCTCTT GACAATCTTC ACCTATCGGC GCTTAATCCA ACACATTTCG TTACTTACCT ACACCACACA GTCAAATCCA CCAGAGGATT CGTGAAGCTA ATGATCGAAC AAATGAAACT AGCTGGTTGG GATATATCAT CAGCTGCTAA TTCGATCCAT CCCGGTGTGT TTTACTACAA GCAAGACCAC AAGTGTTTCA CTTTCGAACA CTTTGTCACC AATGTAATGT TCGAAGCATT TCATCTACCG TACTTCTCAA CTTCAAGCGA TTCAAGAAGC TACAAGAAGA AGAAACAGAG CAATGCAGAT AGAGAAATGT TCTTTGAAAG GTTTAAAGAA CTCAGGTCGA TGAAATCGAA AGATTATCTA ACCGCGCGGC CTAAATCAAG ATTCGCTAGG TTCTGTCGAG CCAAGTACTT GCAGCTTATA CATCCAAAGA TGGAGCAAGC TTTCTTCGGA CATTTGCATT TGAGAAACCA AGTTTCTGCT GGTGAGTTCC CTGAGACGAG CTTATGCTCT GGATTTCTTG AAATGGCGAA AAGGATTTGG CTTTTGCATT GCTTGGCTTT CTCTTTTGAA CATGAAGCTG AGATCTTTCG AGTACCTAAA GGTTGTAGAT TCTCTGAAGT GTATATGAAG AGTGTAGCTG AAGAAGCGTT TTTTCCGGCG GCGGAGAGTT CGCCGGAATC TGAGCCACGT GTCGCGTTCA CGGTTGTTCC AGGGTTTAGG ATTGGGAAGA CTTCAATACA ATGTGAGGTC TATCTCTCGC TTTCATGATC GCCGTTCGAT CTAAGATTCG AAAACGGACG GTGAGGATTC TTGGGCGATT TGGTAATTTC TGGAAATACT GGGGTATTTT TAGAAAATGG AGAAAAATTG TGGGCCGTTG GATTTGAAGT AGCGAAGTAG TGTTGTGTTT AATGTTTTTT TTTCTGTCTT ATGAGTTTTG TCGATATTAG TTCAGAGAAC ACAGAGGCAT CTTTTAGCTG TTGTCCATTG AATATTTATC TCTTTTTTTA ATATAATATG TAAATATTTT AT 
Length1862
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27107277.. 27110647
Download Sequence
A.thaliana
AGI-codeAT1G53380.1
DescriptionPlant protein of unknown function (DUF641)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg494272 casein kinase II beta chain 1
4.58258 Ahg494638 Glycosyl hydrolase family 47 protein
6.78233 Ahg472456 Endoplasmic reticulum vesicle transporter protein
16.4012 Ahg938805 ARM repeat superfamily protein
18.735 Ahg923418 Protein of unknown function (DUF620)
19.2873 Ahg358267 DHBP synthase RibB-like alpha/beta domain
20.0998 Ahg495572 RNA-binding protein 45A
21.9089 Ahg480493 profilin 1
28.2843 Ahg476679 Zinc finger C-x8-C-x5-C-x3-H type family protein
28.8964 Ahg478494 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression