Detail



ID : Ahg484828

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484828|fgenesh2_kg.5__820__AT3G43960.1
Sequence
AAAACAAAAC CAGAAGGAGA AATGGCAATA AGTTTTAGAA CTCTAGCTCT TTTGACCCTC TCGGTGTTAC TAATTTCCTT GTCTCTCGGC GTCGTCACGG CAACAGAGTC GCATCGGAAT GAAGCGGAGG TGCGTACGAT TTACGAGCGA TGGCTTGTAG AGCATGGGAA GAACTATAAC GGTCTTGGAG AGAAGGAGAG ACGGTTCAAG ATCTTCAAAG ACAACTTGAA ACACATCGAA GAACACAATT CGGATCCCAA CCGGAGTTAC GACCGCGGGT TGAACCAGTT TTCGGATCTG ACGGTCGATG AGTTTCAAGC TAGTTACTTG GGTGGGAAGA TAGAAAAGAA AAGCCTATTA GATGTAGCGG AGAGGTATCA GTACAAAGAA GGAGATATTT TGCCTGATGA AGTAGATTGG AGGGAGAGAG GAGCAGTTGT TCCAAGAGTC AAAAGACAAG GAGATTGTGG AAGTTGTTGG GCGTTTGCGG CGACTGGAGC GGTGGAAGGT ATAAACCAGA TCACAACTGG AGAGTTATTA TCTTTATCGG AACAAGAACT CATTGACTGC GATAGAGGGA AAGACAACTT TGGATGTGCT GGAGGTGGAG CAGTGTGGGC CTTTGAGTTC ATTAAAGAAA ACGGTGGTAT AGTAACCGAT GAAGATTACG GTTATACTGG CGATGATACT GCCGCGTGCA AGGCCATTGA GATGAAAACC ACTCGGGTTG TTACCATTAA TGGTCATGAA GTTGTTCCTG TAAATGATGA GATGTCTTTG AAGAAAGCTG TTTCTTATCA ACCTATTAGT GTTATGATAT CAGCTGCAAA CATGAGCGAC TACAAATCTG GTGTATATAA AGGACCATGT AGTAATTTGT GGGGAGACCA TAATGTGCTA ATTGTGGGAT ATGGAACATC ATCAGATGAA GGAGACTACT GGCTTATTCG TAATTCTTGG GGACCAGGGT GGGGAGAAGG CGGATACCTT AGGCTCCAAC GTAACTTCAA TGAACCAACC GGGAAATGTG CAGTCGCAGT AGCACCTGTA TACCCAATCA AGACGAACTC GGCATCCAAT TTATTGTCAC CAAGTGTGTT TAAATTGGTC CTTTTATGTA TTTTTCAGTT GATTAGTTTG GCCTTGCTTT GATATATACT T 
Length1161
Protein Sequence
Protein Residue
Map Locationscaffold_5: 10038046.. 10039450
Download Sequence
A.thaliana
AGI-codeAT3G43960.1
DescriptionCysteine proteinases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.34847 Ahg901222 homeobox-3
10.9545 Ahg470876 Cation/hydrogen exchanger family protein
14.7986 Ahg316947 Pectin lyase-like superfamily protein
17.6635 Ahg351609 Protein of Unknown Function (DUF239)
20.3961 Ahg351608 Protein of Unknown Function (DUF239)
21.7256 Ahg936150 F-box family protein
25.2982 Ahg896878 putative pentacyclic triterpene synthase 3
27.4591 Ahg937171 lanosterol synthase 1
27.7489 Ahg943595 copper ion binding;electron carriers
27.9285 Ahg920128
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression