Detail



ID : Ahg937171

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937171|scaffold_501362.1
Sequence
AGAGATAGAG AGAAAAAGAT ATGTGGAGGT TAAAGTTATC GGAAGGAGAC GAAGAGAGTG TGAATCAACA TGTTGGAAGA CAGTTTTGGG AGTATGATAA CCAATATGGA ACCTCTGAAG AGAGACATCA CATCGCCGAT CTTCGGGGCA ACTTTACTCT CAATCGGTTT TCTTCTAAGC ATAGTTCTGA TCTTCTCTAC CGTTTTCAGT GTTGGAAAGA GGAAGGAAAA GGAAAGGAGA GGCTTCCACA AGTGAAAGTA AAAGAGGGGG GAGAAGGAGA GATAAATGAA GAAGTGGTGA ATGTAACATT AAGAAGAAGT TTGAGATTCT ACTCAACACT TCAATCACAA GATGGGTTTT GGCCTGGTGA TTATGGTGGC CCTTTGTTTC TCTCGCCTGC TCTGGTGATC AGCTTATATG TGACAGAAGT TTTAGACGCA ACTTTAACTG CTCAACATCA AATGGAGATT CGTCGTTATC TCTATAACCA TCAGAACAAG GATGGAGGAT GGGGACTACA CATAGAAGGG AGTAGCACCA TGTTCTGTAC GGCTCTCTCA TACGTAGCAC TAAGGCTCAT GGGGGAAGAA ATGGACGGTG GAGATGGAGC CATGGAATCA GCTAGACTTT GGATTCACCA CCGTGGTGGT GCCACCTTTG TTCCCTCTTG GGGCAAGTTC TGGCTCTCCG TTCTTGGAGC TTATGAATGG AGTGGCAACA ATCCTTTACC TCCAGAGCTA TGGCTCCTTC CTTATAGTCT TCCATTTCAT CCAGGCCGAA TGTGGTGCCA TTGTAGGATG GTTTATCTTC CAATGTCATA TCTATACGGA AGAAGATTTG TTTGTCGCAC TAATGGAACT ATTTTGTCCC TTCGACGAGA GCTTTACACT GTTCCTTATC ATCATATCGA TTGGGACACG GCTCGTAATC AATGTGCCAA GGAGGACTTG TACTATCCAC ATCCAAAGAT TCAAGACGTT CTTTGGAGTT GTCTGAATAA ATTTGGAGAG CCTCTTCTTG AAAGATGGCC ATTGAATAAG CTAAGAAGCC GGGCTCTTCA GACAGTGATG CAACATATTC AATATGAAGA CCAAAACAGC CACTATATTT GTATCGGTCC TGTCAATAAA GTCTTGAATC TTCTTTGTTG TTGGGTTGAT TCCTCGAATT CCGAGGCATT TAAATCTCAC CTCTCGCGTA TTAAAGACTA TTTATGGGTG GCTGAGGATG GAATGAAAAT GCAGGGATAC AACGGATCTC AGCTGTGGGA CGTGACTTTA GCGGTCCAAG CAATCTTGGC TACGAATTTG GTTGATGAGT ATGATTTGAT GCTTAAGAGA GCGCATAACT ACATCAAGAA CACTCAAATA AGGAAAGACA CTTATGGAGA TCCGGGGTTG TGGTACCGAC ACCCGTGCAA GGGAGGATGG GGTTTCTCCA CCGCAGACAA TCCATGGCCT GTTTCTGACT GTACTGCTGA AGCCTTGAAG GCGTCGTTGT TATTGTCACA GATACCAGTT GATTTGGTTG GAGAAGCCAT GCCTGAAGAG CATTTATTTG ATGCTGTTGA CTTTATCTTA TCATTACAGA ACAACAATGG GGGATTTGCG TCATACGAGC TAACTAGATC ATATCCCGCG CTAGAGGTGA TCAATCCATC AGAGACTTTT GGGGATATCA TCATAGATTA TCAATACGTA GAATGTACGT CAGCTGCAAT CCAAGGTCTT GCGTTATTCA CAACGATCAA TCCAACATAC AAGAGGAAAG AGATACTAAT ATGCATTAAC AAAGCAGTTG AGTTTATTGA AAAAACACAA CTTCCGGATG GTTCATGGTA CGGCTCGTGG GGAGTGTGTT TCACCTATGC GACATGGTTT GGTATTAAAG GGATGTTAGC TGCTGGCAAA ACATATGAGA CCAGTCTTTG TATTAGAAAA GCTTGTGGTT TCTTGCTCTC CAAACAACTT TGTTGTGGTG GGTGGGGAGA GAGCTACCTT TCTTGCCAAA ACAAAGTATA CACCAATCTT CCAGGGAACA AATCGCATAT CGTGAACACA TCATGGGCAG TTTTGGCTCT CATTGAAGCA GGACAAGCTA ATAGAGACCT GATGCCATTG CATCGCGGGG CAAAATCGCT GATCAACTCG CAGATGGAAG ACGGAGATTA CCCTCAACAG GAGATATTGG GAGTCTTTAA TCGGAATTGT ATGATCAGCT ACTCAGCTTA TAGAAACATA TTCCCTATTT GGGCTCTAGG AGAGTACCAC AAACTCATGT TGTCTTCGTC TGTATAAACA AGTTTATCTA TGTCAAACT 
Length2319
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11179694.. 11184176
Download Sequence
A.thaliana
AGI-codeAT3G45130.1
Descriptionlanosterol synthase 1
TAIR curator summary
Alias[LAS1][lanosterol synthase 1]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
6.63325 Ahg931106 senescence associated gene 18
7 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
12.49 Ahg950383 Auxin efflux carrier family protein
13.5277 Ahg925744
13.8564 Ahg943595 copper ion binding;electron carriers
15.2971 Ahg351609 Protein of Unknown Function (DUF239)
15.9687 Ahg486726 VANGUARD 1 homolog 2
17.6635 Ahg331346 TRICHOME BIREFRINGENCE-LIKE 4
18.6548 Ahg907331 Mannose-binding lectin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression