Detail


ID : Ahg484938

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484938|fgenesh2_kg.5__930__AT3G45540.1
Sequence
ATGAAAGGAC CAATTCATCA TGATTCCACC ATTACACCTT TGGAGGCTGA GCTTACCGCA TTGAAGCGAG GACTAACCGA AGCTGTCATG GGAAGATGCA TACCAGAGGA GAATAAAACT GCCTTGCTAA TGATTGATGT GCAACGTATA AGAGAAGGAT TTAAGTCGAG CTTTCCGATT TTCGTGGAGG GAAATAGTGT AAGTTATGCT TATAAACTAG CAAGGGAAAC AAAAGTTTCT GAAATTTCAA TCAGCATACC TGTGAATCCT CCTCATCCAG CTAGGGCTAC TCGCAAAAAA ACTTGCAAAA TCTGTTTAGG CGATGATATT AATGAGAATC AAATGTTTTG TGTTGATAAA TGTCGTCATC GATTTTGTTC CGAGTGTATG AAACGACATA TAGAGGTGAG GTTACTCGAG GGAAGTGTAA TGAGATGTCC TCATTATCGC TGCAAGTCTA AGCTGACTTT TGAAAGATGT GAAAATCTTT TGACACCTAA AGTAAGAGAG ATGTGGCAAC AAAGGATCAA AGAGGACTTA ATTCCTGTAA CAAAGAGAAT TTACTGCCCA AACCCGAGGT GCCCGGCTTT AATGTCGGAA ACCGACCTCT CTATATCACC TAAAGAAGAT GAAGTTAGGA GATGCTGCTT CAAATGCGGT CAAATCTTTT GCATCAAATG CAAAGTTTCA TGGCATAGTA ACTTGTCGTG CGACGAATAC AAGAGGTTGC ATCCATATCC TACAGAGAAT GATGGAAAGA TTAAAGCTCT GGCAAATCAG AAAATGTGGC GTCAATGCAA AAAGTGTCAA CACATGATTG AACTTTCTCA AGGATGCGTA CAAGTAAAGT GCAGATGTGG ACATAAGTTT TGCTACCGAT GTGGAGTCCA GGCTGGACGT TGCCAACATG GTCATGGTCT TCCTCCTAGG CCTCCACGGC CGCCAC
Length946
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11464900.. 11466121
Download Sequence
A.thaliana
AGI-codeAT3G45540.1
DescriptionRING/U-box protein with C6HC-type zinc finger
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg933385
4.12311 Ahg925850 TRAF-like superfamily protein
12.2474 Ahg936204
17.1464 Ahg477677 RmlC-like cupins superfamily protein
20.1494 Ahg492188 galactinol synthase 6
40.8044 Ahg922190
40.9878 Ahg494062 expansin A21
45.1664 Ahg359045
48.3115 Ahg343326 Protein kinase protein with tetratricopeptide repeat domain
49.3255 Ahg480825 spermidine hydroxycinnamoyl transferase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression